RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 RAE1P78406 368 aaKnown RBP17.83■□□□□ 0.44
CCDC50-202ENST00000392456 PTRH1Q86Y79 214 aaKnown RBP17.83■□□□□ 0.44
CCDC50-202ENST00000392456 C1orf52Q8N6N3 182 aaKnown RBP17.83■□□□□ 0.44
CCDC50-202ENST00000392456 OR2L8Q8NGY9 312 aa17.83■□□□□ 0.44
CCDC50-202ENST00000392456 SEPHS2Q99611 448 aa17.83■□□□□ 0.44
CCDC50-202ENST00000392456 KCMF1Q9P0J7 381 aa17.83■□□□□ 0.44
CCDC50-202ENST00000392456 V9GYH0 126 aa17.83■□□□□ 0.44
CCDC50-202ENST00000392456 CABIN1Q9Y6J0 2220 aa17.83■□□□□ 0.44
CCDC50-202ENST00000392456 DBX1A6NMT0 343 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 NPIPB8E9PQR5 432 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 LCMT2O60294 686 aaKnown RBP17.82■□□□□ 0.44
CCDC50-202ENST00000392456 PDE9AO76083 593 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 CSF2P04141 144 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 SCN1BQ07699 218 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 PRRT3Q5FWE3 981 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 SLC6A19Q695T7 634 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 PYHIN1Q6K0P9 492 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 TMIGD1Q6UXZ0 262 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 ZNF251Q9BRH9 671 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 KIR3DX1Q9H7L2 352 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 MCUBQ9NWR8 336 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 SDHAF2Q9NX18 166 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 APOL3O95236 402 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 ITGAMP11215 1152 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 FMO3P31513 532 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 GSTM5P46439 218 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 RRAS2P62070 204 aaPredicted RBP17.82■□□□□ 0.44
CCDC50-202ENST00000392456 PRDX1Q06830 199 aaKnown RBP17.82■□□□□ 0.44
CCDC50-202ENST00000392456 MAD2L1Q13257 205 aaPredicted RBP17.82■□□□□ 0.44
CCDC50-202ENST00000392456 ZNF79Q15937 498 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 FAM174BQ3ZCQ3 159 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 SPANXN4Q5MJ08 99 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 C17orf107Q6ZR85 190 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 ZZZ3Q8IYH5 903 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 C1orf216Q8TAB5 229 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 ZNF431Q8TF32 576 aaPredicted RBP17.82■□□□□ 0.44
CCDC50-202ENST00000392456 LCN9Q8WX39 176 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 SORBS1Q9BX66 1292 aaKnown RBP17.82■□□□□ 0.44
CCDC50-202ENST00000392456 DPY30Q9C005 99 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 ALG2Q9H553 416 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 SYNPO2LQ9H987 977 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 DMRT3Q9NQL9 472 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 BABAM2Q9NXR7 383 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 ASIC5Q9NY37 505 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 MALT1Q9UDY8 824 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 PPT2Q9UMR5 302 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 COLEC10Q9Y6Z7 277 aa17.82■□□□□ 0.44
CCDC50-202ENST00000392456 NUP214P35658 2090 aaPredicted RBP17.82■□□□□ 0.44
CCDC50-202ENST00000392456 MYL12BO14950 172 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 RGS10O43665 173 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 MYL12AP19105 171 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 CD38P28907 300 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 HOXA6P31267 233 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 GSK3BP49841 420 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 FOXM1Q08050 763 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 TAF8Q7Z7C8 310 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 CADM4Q8NFZ8 388 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 CXorf40BQ96DE9 158 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 Q96MT0 163 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 LRRC61Q9BV99 259 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 SRRQ9GZT4 340 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 RNF167Q9H6Y7 350 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 BRF2Q9HAW0 419 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 TRBV23-1A0A0A0MS06 115 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 MRPS14O60783 128 aaKnown RBP17.81■□□□□ 0.44
CCDC50-202ENST00000392456 STATHP02808 62 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 NCK1P16333 377 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 PTAFRP25105 342 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 RAB25P57735 213 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 CSNK1G2P78368 415 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 ZXDAP98168 799 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 PUDPQ08623 228 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 IL18R1Q13478 541 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 GPR18Q14330 331 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 PABPC1L2AQ5JQF8 200 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 LAIR1Q6GTX8 287 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 PARGQ86W56 976 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 IFNEQ86WN2 208 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 ZNF761Q86XN6 746 aaPredicted RBP17.81■□□□□ 0.44
CCDC50-202ENST00000392456 NAGSQ8N159 534 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 CHTF18Q8WVB6 975 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 TMEM125Q96AQ2 219 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 RNF145Q96MT1 663 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 RBP7Q96R05 134 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 ABCG2Q9UNQ0 655 aa17.81■□□□□ 0.44
CCDC50-202ENST00000392456 PCDHGA12O60330 932 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 EEDO75530 441 aaKnown RBP17.8■□□□□ 0.44
CCDC50-202ENST00000392456 GRK5P34947 590 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 LIMK1P53667 647 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 ACSM2AQ08AH3 577 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 RIPPLY1Q0D2K3 151 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 ACSM2BQ68CK6 577 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 HIST2H2AA3Q6FI13 130 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 ADCK2Q7Z695 626 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 OR4K1Q8NGD4 311 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 SLC13A3Q8WWT9 602 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 ZBTB18Q99592 522 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 DPYSL5Q9BPU6 564 aa17.8■□□□□ 0.44
CCDC50-202ENST00000392456 DPCDQ9BVM2 203 aaPredicted RBP17.8■□□□□ 0.44
CCDC50-202ENST00000392456 SLC6A20Q9NP91 592 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms