RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 SLC16A5O15375 505 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 ZDHHC11BP0C7U3 371 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 CDH15P55291 814 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 PON2Q15165 354 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 PAGE3Q5JUK9 113 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 LBX2Q6XYB7 198 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 UQCC2Q9BRT2 126 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 SUV39H2Q9H5I1 410 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 SCPEP1Q9HB40 452 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 CLDND1Q9NY35 253 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 A0A096LPI6 279 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 ZNF701M0R085 212 aaPredicted RBP14.03□□□□□ -0.16
CCDC50-201ENST00000392455 RPL35P42766 123 aaKnown RBP14.03□□□□□ -0.16
CCDC50-201ENST00000392455 PTPRCAPQ14761 206 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 PIGWQ7Z7B1 504 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 SYT14Q8NB59 555 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 OR5P2Q8WZ92 322 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 ADIPOR1Q96A54 375 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 RAB7BQ96AH8 199 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 TMPRSS5Q9H3S3 457 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 SUOXP51687 545 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 ARHGAP1Q07960 439 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 MPEG1Q2M385 716 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 PHYHD1Q5SRE7 291 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 TMEM198Q66K66 360 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 FAM58AQ8N1B3 248 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 Q8N9G6 341 aaPredicted RBP14.03□□□□□ -0.16
CCDC50-201ENST00000392455 FCRL5Q96RD9 977 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 TMEM248Q9NWD8 314 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 TBX18O95935 607 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 HLA-DQB2P05538 268 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 PNMTP11086 282 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 EDNRBP24530 442 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 GDF10P55107 478 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 MLLT10P55197 1068 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 PMPCAQ10713 525 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 LIPKQ5VXJ0 399 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 BLACEA4D250 179 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 RPS15AP62244 130 aaKnown RBP14.03□□□□□ -0.16
CCDC50-201ENST00000392455 ELOCQ15369 112 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 OR51T1Q8NGJ9 327 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 OR13C4Q8NGS5 318 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 TRMT2BQ96GJ1 504 aaKnown RBP14.03□□□□□ -0.16
CCDC50-201ENST00000392455 CHRDL1Q9BU40 450 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 DPCDQ9BVM2 203 aaPredicted RBP14.03□□□□□ -0.16
CCDC50-201ENST00000392455 KCNK2O95069 426 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 P04436 131 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 SPHARQ15513 63 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 SIRPB2Q5JXA9 342 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 TANGO2Q6ICL3 276 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 DEDD2Q8WXF8 326 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 SLAMF9Q96A28 289 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 SLC45A3Q96JT2 553 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 OR1F2PQ96R84 312 aa14.03□□□□□ -0.16
CCDC50-201ENST00000392455 MROH1Q8NDA8 1641 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 NIPSNAP2O75323 286 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 SLC30A7Q8NEW0 376 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 AKTIPQ9H8T0 292 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 ROBO1Q9Y6N7 1651 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 IRS2Q9Y4H2 1338 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 H3BSH0 61 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 SLC10A6Q3KNW5 377 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 PAN3Q58A45 887 aaKnown RBP14.02□□□□□ -0.16
CCDC50-201ENST00000392455 BAGE3Q86Y29 109 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 BAGE2Q86Y30 109 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 SCML4Q8N228 414 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 DEFB119Q8N690 84 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 TEPSINQ96N21 525 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 INPP5EQ9NRR6 644 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 DNAJC27Q9NZQ0 273 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 SLC17A6Q9P2U8 582 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 TGOLN2O43493 480 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 CHRNA1P02708 482 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 RPS15P62841 145 aaKnown RBP14.02□□□□□ -0.16
CCDC50-201ENST00000392455 RBPJQ06330 500 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 SERINC5Q86VE9 423 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 MINDY1Q8N5J2 469 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 OR51G2Q8NGK0 314 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 FNDC8Q8TC99 324 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 SGCZQ96LD1 299 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 NT5DC2Q9H857 520 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 DTLQ9NZJ0 730 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 STEAP1Q9UHE8 339 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 ACAD8Q9UKU7 415 aa14.02□□□□□ -0.16
CCDC50-201ENST00000392455 ARHGEF17Q96PE2 2063 aaPredicted RBP14.02□□□□□ -0.16
CCDC50-201ENST00000392455 SLIT3O75094 1523 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 A0A0G2JLL6 359 aaPredicted RBP14.02□□□□□ -0.17
CCDC50-201ENST00000392455 SOWAHBA6NEL2 793 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 TYRP14679 529 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 CTSL3PQ5NE16 218 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 STEAP3Q658P3 488 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 TMPRSS9Q7Z410 1059 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 PRRT2Q7Z6L0 340 aaPredicted RBP14.02□□□□□ -0.17
CCDC50-201ENST00000392455 PPIL3Q9H2H8 161 aaKnown RBP14.02□□□□□ -0.17
CCDC50-201ENST00000392455 UFSP2Q9NUQ7 469 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 DNAJB11Q9UBS4 358 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 DPM1O60762 260 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 RPS24P62847 133 aaKnown RBP14.02□□□□□ -0.17
CCDC50-201ENST00000392455 GLO1Q04760 184 aa14.02□□□□□ -0.17
CCDC50-201ENST00000392455 ACSBG2Q5FVE4 666 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms