RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PARP8Q8N3A8 854 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 OR2I1PQ8NGU4 316 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 HRASLS5Q96KN8 279 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 VSTM2LQ96N03 204 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 APOL4Q9BPW4 351 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 NIPSNAP1Q9BPW8 284 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 ZNF304Q9HCX3 659 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 ENOPH1Q9UHY7 261 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 GMPPBQ9Y5P6 360 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 FER1L5A0AVI2 2057 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 FRYLO94915 3013 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 OR2W5A6NFC9 320 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 BRINP1O60477 761 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 DBIP07108 87 aaKnown RBP10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 IL7RP16871 459 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 FBLP22087 321 aaKnown RBP10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 EPHA2P29317 976 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 SSTR4P31391 388 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 HLCSP50747 726 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 ZNF267Q14586 743 aaPredicted RBP10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 EIPR1Q53HC9 387 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 FGD3Q5JSP0 725 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 C6orf141Q5SZD1 244 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 FOXB2Q5VYV0 432 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 AQP11Q8NBQ7 271 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 ADAMTS16Q8TE57 1224 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 CNDP2Q96KP4 475 aaKnown RBP10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 FNDC11Q9BVV2 318 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 SRPK3Q9UPE1 567 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 GPR55Q9Y2T6 319 aaPredicted RBP10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 COL5A1P20908 1838 aaPredicted RBP10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 IGKV3D-11A0A0A0MRZ8 115 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 IGHV5-10-1A0A0J9YXX1 117 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 HRKO00198 91 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 ADAP00813 363 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 CDH15P55291 814 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 EEF1A1P68104 462 aaKnown RBP10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 RPP38P78345 283 aaKnown RBP10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 TOP3AQ13472 1001 aaPredicted RBP10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 SEC23BQ15437 767 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 GPR68Q15743 365 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 MEP1AQ16819 746 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 ZNF836Q6ZNA1 936 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 CLIP4Q8N3C7 705 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 LINC00471Q8N535 108 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 IFI44Q8TCB0 444 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 PTCHD1Q96NR3 888 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 YIPF2Q9BWQ6 316 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 MAN2C1Q9NTJ4 1040 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 NDUFA13Q9P0J0 144 aa10.64□□□□□ -0.71
SMARCAL1-203ENST00000392128 NCOR1O75376 2440 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 SMIM31A0A1B0GVY4 71 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 GXYLT2A0PJZ3 443 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 SH3PXD2BA1X283 911 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 KCNK2O95069 426 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 GASTP01350 101 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 IFNA16P05015 189 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 CRHBPP24387 322 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 DUSP3P51452 185 aaPredicted RBP10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 NUP107P57740 925 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 IL5RAQ01344 420 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 CDK5R2Q13319 367 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 LAIR2Q6ISS4 152 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 RHBDD2Q6NTF9 364 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 SATL1Q86VE3 508 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 ZNF615Q8N8J6 731 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 DRAXINQ8NBI3 349 aaPredicted RBP10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 OR7G1Q8NGA0 311 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 SLC7A13Q8TCU3 470 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 ZNF566Q969W8 418 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 SLX1AQ9BQ83 275 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 CNPPD1Q9BV87 410 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 OR10A5Q9H207 317 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 FBXO34Q9NWN3 711 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 CHCHD3Q9NX63 227 aaKnown RBP10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 MGAT4BQ9UQ53 548 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 ERVK-19Q9WJR5 959 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 TPST2O60704 377 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 CLPSP04118 112 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 NID1P14543 1247 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 TRHRP34981 398 aaPredicted RBP10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 ALDH3B2P48448 385 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 RGS8P57771 180 aaPredicted RBP10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 GABARAPL2P60520 117 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 DAB2P98082 770 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 MAPK14Q16539 360 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 TBC1D25Q3MII6 688 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 NADK2Q4G0N4 442 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 ARHGAP40Q5TG30 622 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 FIGNL1Q6PIW4 674 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 CCDC74BQ96LY2 380 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 DGCR6LQ9BY27 220 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 ANKRD19PQ9H560 264 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 MKKSQ9NPJ1 570 aaPredicted RBP10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 PRODH2Q9UF12 536 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 BLOC1S6Q9UL45 172 aa10.63□□□□□ -0.71
SMARCAL1-203ENST00000392128 SEC16AO15027 2179 aa10.62□□□□□ -0.71
SMARCAL1-203ENST00000392128 CENPVL1A0A0U1RR11 272 aa10.62□□□□□ -0.71
SMARCAL1-203ENST00000392128 C17orf105B2RV13 164 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms