RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SAMD14Q8IZD0 417 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 TOR1AIP2Q8NFQ8 470 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 WDR20Q8TBZ3 569 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 CCDC107Q8WV48 283 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 PDFQ9HBH1 243 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 TDP1Q9NUW8 608 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 RABL2BQ9UNT1 228 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 ATAD5Q96QE3 1844 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 STRCQ7RTU9 1775 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 EMC8O43402 210 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 SPDEFO95238 335 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 C1QBP02746 253 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 HRGP04196 525 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 GYPBP06028 91 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 ASGR2P07307 311 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 TACSTD2P09758 323 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 TRAPPC2P0DI81 140 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 TRAPPC2BP0DI82 140 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 GTF2F2P13984 249 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 IMPA1P29218 277 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 SLC6A6P31641 620 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 ETV5P41161 510 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 ETV1P50549 477 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 ACSM3Q53FZ2 586 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 LRRC28Q86X40 367 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 MS4A15Q8N5U1 240 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 NANOGP1Q8N7R0 232 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 SPERTQ8NA61 448 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 OR4E2Q8NGC2 313 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 SLC41A3Q96GZ6 507 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 WDR26Q9H7D7 661 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 SYNDIG1Q9H7V2 258 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 DIMT1Q9UNQ2 313 aaKnown RBP12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 COLEC10Q9Y6Z7 277 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 CD2P06729 351 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 FURINP09958 794 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 CR2P20023 1033 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 SHC1P29353 583 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 HOXA9P31269 272 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 CTNNB1P35222 781 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 GZMKP49863 264 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 PGDP52209 483 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 BOLLQ8N9W6 283 aaKnown RBP12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 FIBINQ8TAL6 211 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 SLC7A13Q8TCU3 470 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 THEM6Q8WUY1 208 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 ISG20Q96AZ6 181 aaKnown RBP12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 KLF16Q9BXK1 252 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 SRRQ9GZT4 340 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 SRMSQ9H3Y6 488 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZDHHC4Q9NPG8 344 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 A0A0G2JMP0 313 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 A0A0X1KG70 313 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 DISC1C4P0D8 188 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 ZNF432O94892 652 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 AGR2O95994 175 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 XCR1P46094 333 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 SWI5Q1ZZU3 235 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 HAGHLQ6PII5 290 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 OR4M2Q8NGB6 313 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 OR4K13Q8NH42 304 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 CASTOR1Q8WTX7 329 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 NR4A3Q92570 626 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 IRF7Q92985 503 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 METTL2AQ96IZ6 378 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 S100A13Q99584 98 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 TSNAXQ99598 290 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 BABAM2Q9NXR7 383 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 C13orf42A0A1B0GVH6 325 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 MAP3K8P41279 467 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 GBX1Q14549 363 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 ARSKQ6UWY0 536 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 C3P1Q6ZMU1 363 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 GIMAP1Q8WWP7 306 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 PRRC1Q96M27 445 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 SLC22A12Q96S37 553 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 KLHL42Q9P2K6 505 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 LIPT1Q9Y234 373 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 MED16Q9Y2X0 877 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 GRXCR1A8MXD5 290 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 UBXN7O94888 489 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 KIR2DL3P43628 341 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 P2RX3P56373 397 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 TRAM1Q15629 374 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 OR4C11Q6IEV9 310 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 C10orf111Q8N326 155 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 WFDC5Q8TCV5 224 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 SETD7Q8WTS6 366 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 DEFB118Q96PH6 123 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 POLDIP3Q9BY77 421 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 MED20Q9H944 212 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 SLC7A7Q9UM01 511 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 TMEM5Q9Y2B1 443 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 LATO43561 262 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 SLC22A5O76082 557 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 AK4P27144 223 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 OC90Q02509 493 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 C3orf38Q5JPI3 329 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 FIGNL1Q6PIW4 674 aa12.39□□□□□ -0.43
TRAPPC9-201ENST00000389328 SDR16C5Q8N3Y7 309 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms