RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 TNFSF15O95150 251 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 IGKV1D-16P01601 117 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 OR2T5Q6IEZ7 315 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 PAPD4Q6PIY7 484 aaKnown RBP24.84■■□□□ 1.57
MSX1-201ENST00000382723 TMEM205Q6UW68 189 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 C9orf40Q8IXQ3 194 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 PEX5LQ8IYB4 626 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 CATSPER1Q8NEC5 780 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 OR2T29Q8NH02 315 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 BTBD9Q96Q07 612 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 AMBRA1Q9C0C7 1298 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 CACYBPQ9HB71 228 aaKnown RBP24.84■■□□□ 1.57
MSX1-201ENST00000382723 C19orf25Q9UFG5 118 aaPredicted RBP24.84■■□□□ 1.57
MSX1-201ENST00000382723 CBLCQ9ULV8 474 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 U3KQV3 271 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 CENPVL1A0A0U1RR11 272 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 SAGE2PA6NJ88 616 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 PRSS23O95084 383 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 UMODP07911 640 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 ZBTB49Q6ZSB9 765 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 WFDC6Q9BQY6 131 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 PINK1Q9BXM7 581 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 VNN3Q9NY84 501 aa24.84■■□□□ 1.57
MSX1-201ENST00000382723 C2orf92A0A1B0GVN3 265 aa24.83■■□□□ 1.57
MSX1-201ENST00000382723 TTC36A6NLP5 189 aa24.83■■□□□ 1.57
MSX1-201ENST00000382723 IFNW1P05000 195 aa24.83■■□□□ 1.57
MSX1-201ENST00000382723 ATP6V1C1P21283 382 aa24.83■■□□□ 1.57
MSX1-201ENST00000382723 PIGAP37287 484 aa24.83■■□□□ 1.57
MSX1-201ENST00000382723 PPICP45877 212 aa24.83■■□□□ 1.57
MSX1-201ENST00000382723 NRF1Q16656 503 aa24.83■■□□□ 1.57
MSX1-201ENST00000382723 CARM1Q86X55 608 aa24.83■■□□□ 1.57
MSX1-201ENST00000382723 ZSCAN1Q8NBB4 408 aa24.83■■□□□ 1.57
MSX1-201ENST00000382723 B3GNT7Q8NFL0 401 aa24.83■■□□□ 1.57
MSX1-201ENST00000382723 APOBEC4Q8WW27 367 aaKnown RBP24.83■■□□□ 1.57
MSX1-201ENST00000382723 SLC29A1Q99808 456 aa24.83■■□□□ 1.57
MSX1-201ENST00000382723 SPRY4Q9C004 299 aa24.83■■□□□ 1.57
MSX1-201ENST00000382723 NRSN2Q9GZP1 204 aa24.83■■□□□ 1.57
MSX1-201ENST00000382723 SAP130Q9H0E3 1048 aa24.83■■□□□ 1.57
MSX1-201ENST00000382723 NXF5Q9H1B4 397 aaKnown RBP24.83■■□□□ 1.57
MSX1-201ENST00000382723 TRIM45Q9H8W5 580 aaPredicted RBP24.83■■□□□ 1.57
MSX1-201ENST00000382723 DLL1O00548 723 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 PEX12O00623 359 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 SOCS2O14508 198 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 KIAA0513O60268 411 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 E2F6O75461 281 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 EPPINO95925 133 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 IL7RP16871 459 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 RNF144AP50876 292 aaPredicted RBP24.82■■□□□ 1.56
MSX1-201ENST00000382723 NOVA1P51513 510 aaKnown RBP24.82■■□□□ 1.56
MSX1-201ENST00000382723 AQP4P55087 323 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 KCNC4Q03721 635 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 EBPQ15125 230 aaKnown RBP24.82■■□□□ 1.56
MSX1-201ENST00000382723 FLYWCH1Q4VC44 716 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 HLA-DQA1Q5Y7H0 255 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 SLC29A4Q7RTT9 530 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 RBM45Q8IUH3 476 aaKnown RBP24.82■■□□□ 1.56
MSX1-201ENST00000382723 CBR4Q8N4T8 237 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 BCORP1Q8N888 145 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 NFAM1Q8NET5 270 aaPredicted RBP24.82■■□□□ 1.56
MSX1-201ENST00000382723 OR4D11Q8NGI4 311 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 OR2Y1Q8NGV0 311 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 LMF1Q96S06 567 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 LPAR4Q99677 370 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 WDR77Q9BQA1 342 aaPredicted RBP24.82■■□□□ 1.56
MSX1-201ENST00000382723 THSD1Q9NS62 852 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 ZNF443Q9Y2A4 671 aaPredicted RBP24.82■■□□□ 1.56
MSX1-201ENST00000382723 AGAP5A6NIR3 686 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 J3KTA2 159 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 M0R3H8 397 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 TM4SF5O14894 197 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 CYC1P08574 325 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 TCN2P20062 427 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 GPR143P51810 404 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 NHLH1Q02575 133 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 MAPK14Q16539 360 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 LACC1Q8IV20 430 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 CT55Q8WUE5 264 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 ADIPOR1Q96A54 375 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 ZNF300Q96RE9 604 aaPredicted RBP24.82■■□□□ 1.56
MSX1-201ENST00000382723 ZNF184Q99676 751 aaPredicted RBP24.82■■□□□ 1.56
MSX1-201ENST00000382723 C9orf16Q9BUW7 83 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 SLC13A4Q9UKG4 626 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 IFT52Q9Y366 437 aa24.82■■□□□ 1.56
MSX1-201ENST00000382723 MAGED1Q9Y5V3 778 aaPredicted RBP24.82■■□□□ 1.56
MSX1-201ENST00000382723 CDC14CA4D256 554 aa24.81■■□□□ 1.56
MSX1-201ENST00000382723 CLDN24A6NM45 220 aa24.81■■□□□ 1.56
MSX1-201ENST00000382723 ACOX3O15254 700 aa24.81■■□□□ 1.56
MSX1-201ENST00000382723 ZNF26P17031 533 aaPredicted RBP24.81■■□□□ 1.56
MSX1-201ENST00000382723 ITGA2P17301 1181 aa24.81■■□□□ 1.56
MSX1-201ENST00000382723 FOLR3P41439 243 aa24.81■■□□□ 1.56
MSX1-201ENST00000382723 DNAJC9Q8WXX5 260 aa24.81■■□□□ 1.56
MSX1-201ENST00000382723 LCORQ96JN0 433 aaPredicted RBP24.81■■□□□ 1.56
MSX1-201ENST00000382723 WWTR1Q9GZV5 400 aa24.81■■□□□ 1.56
MSX1-201ENST00000382723 VCXQ9H320 206 aa24.81■■□□□ 1.56
MSX1-201ENST00000382723 POLE3Q9NRF9 147 aa24.81■■□□□ 1.56
MSX1-201ENST00000382723 RLIMQ9NVW2 624 aa24.81■■□□□ 1.56
MSX1-201ENST00000382723 KCNE5Q9UJ90 142 aa24.81■■□□□ 1.56
MSX1-201ENST00000382723 ZNF232Q9UNY5 417 aa24.81■■□□□ 1.56
MSX1-201ENST00000382723 TESMINQ9Y4I5 508 aa24.81■■□□□ 1.56
MSX1-201ENST00000382723 LGI1O95970 557 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms