RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SGO1Q5FBB7 561 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 XKR7Q5GH72 579 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 CNKSR3Q6P9H4 555 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 TMIGD1Q6UXZ0 262 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 SLC29A4Q7RTT9 530 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 FAM122BQ7Z309 247 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 C1orf52Q8N6N3 182 aaKnown RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 CHTF18Q8WVB6 975 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 TM9SF4Q92544 642 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ZC3H10Q96K80 434 aaKnown RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 FCRL2Q96LA5 508 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 C12orf66Q96MD2 445 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 CASD1Q96PB1 797 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ATF6BQ99941 703 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 THAP7Q9BT49 309 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 SPRTNQ9H040 489 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 SLC25A32Q9H2D1 315 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 YARS2Q9Y2Z4 477 aaKnown RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 LTBP2Q14767 1821 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 LOC285095A0A1B0GVY8 99 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ABHD14A-ACY1A0A1B0GW23 586 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ZNF593O00488 134 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 SLC7A4O43246 635 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 MAFKO60675 156 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 KRT33AO76009 404 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ANKRD34CP0C6C1 535 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 NQO2P16083 231 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 NFYBP25208 207 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 GIFP27352 417 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ABCD3P28288 659 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 CRABP1P29762 137 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ADRA1AP35348 466 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 PPM1AP35813 382 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 GNALP38405 381 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 SLC11A2P49281 568 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 AKR1C2P52895 323 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 NFKB2Q00653 900 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 AKR1C1Q04828 323 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 MINDY4Q4G0A6 757 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ATP13A5Q4VNC0 1218 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 GPRC6AQ5T6X5 926 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 SCD5Q86SK9 330 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ARHGAP12Q8IWW6 846 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ZNF683Q8IZ20 524 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ZNF784Q8NCA9 323 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 CCDC54Q8NEL0 328 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 RFT1Q96AA3 541 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 CHFRQ96EP1 664 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 KCTD7Q96MP8 289 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ZNF559Q9BR84 538 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 TMPRSS13Q9BYE2 586 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 POLR2J2Q9GZM3 115 aaKnown RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ARL6Q9H0F7 186 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 DUSP12Q9UNI6 340 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ARPC5O15511 151 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 LRRTM2O43300 516 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ESR1P03372 595 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 UGT2B7P16662 529 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 HOXB6P17509 224 aaKnown RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ILF3Q12906 894 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ZSWIM7Q19AV6 140 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ALG11Q2TAA5 492 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 CLEC2AQ6UVW9 174 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 Q6ZTK2 550 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 HFE2Q6ZVN8 426 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 ISCA2Q86U28 154 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 PTGR2Q8N8N7 351 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 BOLLQ8N9W6 283 aaKnown RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 FAM212BQ9NTI7 297 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-201ENST00000379989 POFUT2Q9Y2G5 429 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 GREB1Q4ZG55 1949 aa7.04□□□□□ -1.28
CDKL5-201ENST00000379989 A0A0A6YYC8 382 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-201ENST00000379989 I3L1I5 382 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-201ENST00000379989 J3KR12 359 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 SPDEFO95238 335 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 C6orf47O95873 294 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 SEMG1P04279 462 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 FGF1P05230 155 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 FABP3P05413 133 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 SAGP10523 405 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-201ENST00000379989 AHCYP23526 432 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 CD86P42081 329 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 MAPK8P45983 427 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 ACVR1Q04771 509 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 SERINC3Q13530 473 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 HTR4Q13639 388 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 SLC39A12Q504Y0 691 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 ZNF789Q5FWF6 425 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 C6orf136Q5SQH8 315 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 ARHGAP11AQ6P4F7 1023 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 LYPD4Q6UWN0 246 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 TMEM207Q6UWW9 146 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 DEF8Q6ZN54 512 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 GPRIN1Q7Z2K8 1008 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 RTN4RL1Q86UN2 441 aaPredicted RBP7.03□□□□□ -1.28
CDKL5-201ENST00000379989 TMEM185AQ8NFB2 350 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 OR4A15Q8NGL6 344 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 DNAJB8Q8NHS0 232 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 WFIKKN2Q8TEU8 576 aa7.03□□□□□ -1.28
CDKL5-201ENST00000379989 GCDHQ92947 438 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms