RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 EFNB1P98172 346 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 MLLT1Q03111 559 aaPredicted RBP20.23■□□□□ 0.83
RNF39-202ENST00000376751 SSX1Q16384 188 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 MAPK14Q16539 360 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 C19orf48Q6RUI8 117 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 LINC00299Q6ZSB3 139 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 SYT13Q7L8C5 426 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 GDF7Q7Z4P5 450 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 C11orf74Q86VG3 221 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 PARGQ86W56 976 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 ATCAYQ86WG3 371 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 ZNF687Q8N1G0 1237 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 ARHGEF39Q8N4T4 335 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 PIK3R3Q92569 461 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 ANKRD9Q96BM1 317 aaPredicted RBP20.23■□□□□ 0.83
RNF39-202ENST00000376751 KLHDC7BQ96G42 594 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 MSANTD3Q96H12 275 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 OPALINQ96PE5 141 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 CCDC3Q9BQI4 270 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 ZNF350Q9GZX5 532 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 PIGUQ9H490 435 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 HMG20AQ9NP66 347 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 KLHL28Q9NXS3 571 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 MAT2BQ9NZL9 334 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 TMEM131Q92545 1883 aa20.22■□□□□ 0.83
RNF39-202ENST00000376751 PIP5K1CO60331 668 aa20.22■□□□□ 0.83
RNF39-202ENST00000376751 RNF144AP50876 292 aaPredicted RBP20.22■□□□□ 0.83
RNF39-202ENST00000376751 ST3GAL3Q11203 375 aa20.22■□□□□ 0.83
RNF39-202ENST00000376751 GPR68Q15743 365 aa20.22■□□□□ 0.83
RNF39-202ENST00000376751 PRICKLE4Q2TBC4 344 aa20.22■□□□□ 0.83
RNF39-202ENST00000376751 MANEAQ5SRI9 462 aa20.22■□□□□ 0.83
RNF39-202ENST00000376751 DGAT2L6Q6ZPD8 337 aa20.22■□□□□ 0.83
RNF39-202ENST00000376751 PEX5LQ8IYB4 626 aa20.22■□□□□ 0.83
RNF39-202ENST00000376751 ABTB1Q969K4 478 aaPredicted RBP20.22■□□□□ 0.83
RNF39-202ENST00000376751 TMEM80Q96HE8 168 aa20.22■□□□□ 0.83
RNF39-202ENST00000376751 ZNF582Q96NG8 517 aaPredicted RBP20.22■□□□□ 0.83
RNF39-202ENST00000376751 CHCHD6Q9BRQ6 235 aa20.22■□□□□ 0.83
RNF39-202ENST00000376751 TAPBPLQ9BX59 468 aa20.22■□□□□ 0.83
RNF39-202ENST00000376751 SEMA6CQ9H3T2 930 aa20.22■□□□□ 0.83
RNF39-202ENST00000376751 B3GNT3Q9Y2A9 372 aa20.22■□□□□ 0.83
RNF39-202ENST00000376751 RPL36Q9Y3U8 105 aaKnown RBP20.22■□□□□ 0.83
RNF39-202ENST00000376751 A0A087WV62 115 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 NPIPA5A0A0B4J1W7 369 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 AGAP5A6NIR3 686 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 NPIPA7E9PJI5 369 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 ARHGAP33O14559 1287 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 AP3D1O14617 1153 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 PLOD3O60568 738 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 UBXN7O94888 489 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 NPIPA8P0DM63 369 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 CSTF2P33240 577 aaKnown RBP eCLIP20.21■□□□□ 0.83
RNF39-202ENST00000376751 ZNF136P52737 540 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 TSPAN31Q12999 210 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 ITGADQ13349 1161 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 GJD3Q8N144 294 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 DEFB119Q8N690 84 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 OR9A4Q8NGU2 314 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 SLC41A3Q96GZ6 507 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 WDR12Q9GZL7 423 aaKnown RBP20.21■□□□□ 0.83
RNF39-202ENST00000376751 ANKRD19PQ9H560 264 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 TRIM45Q9H8W5 580 aaPredicted RBP20.21■□□□□ 0.83
RNF39-202ENST00000376751 KCNE5Q9UJ90 142 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 ERGIC3Q9Y282 383 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 SPACA6W5XKT8 324 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 IGHV1OR15-9A0A0B4J2B8 117 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 DSCR3O14972 297 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 CSO75390 466 aaKnown RBP20.21■□□□□ 0.83
RNF39-202ENST00000376751 SULT1C4O75897 302 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 MED26O95402 600 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 WNT1P04628 370 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 SRFP11831 508 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 PTNP21246 168 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 RPS4Y1P22090 263 aaKnown RBP20.21■□□□□ 0.83
RNF39-202ENST00000376751 SLC25A30Q5SVS4 291 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 DCST2Q5T1A1 773 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 PAQR6Q6TCH4 344 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 DCDC5Q6ZRR9 648 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 USP43Q70EL4 1123 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 AVL9Q8NBF6 648 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 TSTD1Q8NFU3 115 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 LRR1Q96L50 414 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 SLC2A4RGQ9NR83 387 aa20.21■□□□□ 0.83
RNF39-202ENST00000376751 METTL15A6NJ78 407 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 OR5F1O95221 314 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 ALOX5P09917 674 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 PRG2P13727 222 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 ZNF12P17014 697 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 BMP8BP34820 402 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 SMSP52788 366 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 RAB38P57729 211 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 TUBA1BP68363 451 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 DUSP8Q13202 625 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 SRSF5Q13243 272 aaKnown RBP20.2■□□□□ 0.82
RNF39-202ENST00000376751 NCF4Q15080 339 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 DECR1Q16698 335 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 ARMC6Q6NXE6 501 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 TUBA1AQ71U36 451 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 MRGPREQ86SM8 312 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 SLC34A3Q8N130 599 aa20.2■□□□□ 0.82
RNF39-202ENST00000376751 C19orf47Q8N9M1 422 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms