RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 JAM3Q9BX67 310 aa19.82■□□□□ 0.76
UPF3A-202ENST00000375299 TDP1Q9NUW8 608 aa19.82■□□□□ 0.76
UPF3A-202ENST00000375299 COL4A3Q01955 1670 aa19.82■□□□□ 0.76
UPF3A-202ENST00000375299 A0A1W2PRU2 124 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 RFXAPO00287 272 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 ATP6V1E1P36543 226 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 SMARCD3Q6STE5 483 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 DTX3Q8N9I9 347 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 PIGXQ8TBF5 258 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 CYB5D2Q8WUJ1 264 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 AMDHD1Q96NU7 426 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 TEX12Q9BXU0 123 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 DPAGT1Q9H3H5 408 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 MTG2Q9H4K7 406 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 DDX31Q9H8H2 851 aaKnown RBP19.81■□□□□ 0.76
UPF3A-202ENST00000375299 HEXA-AS1Q9H8Q6 139 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 PELI2Q9HAT8 420 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 SEMA4GQ9NTN9 838 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 NUDT15Q9NV35 164 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 MED17Q9NVC6 651 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 TAC3Q9UHF0 121 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 OR5K3A6NET4 321 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 EEF1E1O43324 174 aaKnown RBP19.81■□□□□ 0.76
UPF3A-202ENST00000375299 NTN1O95631 604 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 UBL4AP11441 157 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 PITPNBP48739 271 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 BDH1Q02338 343 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 COL28A1Q2UY09 1125 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 CD276Q5ZPR3 534 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 TMEM215Q68D42 235 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 RRM2BQ7LG56 351 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 TMCO2Q7Z6W1 182 aaPredicted RBP19.81■□□□□ 0.76
UPF3A-202ENST00000375299 OAFQ86UD1 273 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 GPR135Q8IZ08 494 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 OR11H4Q8NGC9 324 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 NR4A3Q92570 626 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 OSTF1Q92882 214 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 RAD51AP1Q96B01 352 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 KCTD12Q96CX2 325 aaKnown RBP19.81■□□□□ 0.76
UPF3A-202ENST00000375299 DTD2Q96FN9 168 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 YIPF4Q9BSR8 244 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 DPEP2Q9H4A9 486 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 CUEDC1Q9NWM3 386 aaPredicted RBP19.81■□□□□ 0.76
UPF3A-202ENST00000375299 ZNF624Q9P2J8 865 aaPredicted RBP19.81■□□□□ 0.76
UPF3A-202ENST00000375299 TNFRSF10DQ9UBN6 386 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 ASF1AQ9Y294 204 aa19.81■□□□□ 0.76
UPF3A-202ENST00000375299 A0A0G2JPF8 293 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 HNRNPCL2B2RXH8 293 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 HNRNPCL3B7ZW38 293 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 TEX28O15482 410 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 NFATC1O95644 943 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 HNRNPCL4P0DMR1 293 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 POLR2CP19387 275 aaPredicted RBP19.8■□□□□ 0.76
UPF3A-202ENST00000375299 ACSL1P33121 698 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 PRKAG1P54619 331 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 PGGHGQ32M88 737 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 SLAIN1Q8ND83 568 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 SORCS1Q8WY21 1168 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 QRSL1Q9H0R6 528 aaKnown RBP19.8■□□□□ 0.76
UPF3A-202ENST00000375299 ISG20L2Q9H9L3 353 aaKnown RBP19.8■□□□□ 0.76
UPF3A-202ENST00000375299 MARK1Q9P0L2 795 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 NUBP2Q9Y5Y2 271 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 CPSF4LA6NMK7 179 aaKnown RBP19.8■□□□□ 0.76
UPF3A-202ENST00000375299 NDUFS4O43181 175 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 HRO43593 1189 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 KELP23276 732 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 THBS2P35442 1172 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 NNMTP40261 264 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 STAT5AP42229 794 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 RNF144AP50876 292 aaPredicted RBP19.8■□□□□ 0.76
UPF3A-202ENST00000375299 GNA13Q14344 377 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 HACD4Q5VWC8 232 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 LUZP2Q86TE4 346 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 SIRT6Q8N6T7 355 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 SAMD12Q8N8I0 201 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 OR5AR1Q8NGP9 310 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 HSD17B8Q92506 261 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 DIO2Q92813 273 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 RGMAQ96B86 450 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 CCDC120Q96HB5 630 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 OR2M2Q96R28 347 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 SLC46A2Q9BY10 475 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 OR51J1Q9H342 316 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 CCL26Q9Y258 94 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 LRRK1Q38SD2 2015 aa19.8■□□□□ 0.76
UPF3A-202ENST00000375299 FEZF1A0PJY2 475 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 POP7O75817 140 aaKnown RBP19.79■□□□□ 0.76
UPF3A-202ENST00000375299 ANXA11P50995 505 aaKnown RBP19.79■□□□□ 0.76
UPF3A-202ENST00000375299 RAB8AP61006 207 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 ZNF547Q8IVP9 402 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 FAM20CQ8IXL6 584 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 GJD3Q8N144 294 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 FBXL6Q8N531 539 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 AMER3Q8N944 861 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 MRGPRX3Q96LB0 322 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 ARHGDIGQ99819 225 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 SAGE1Q9NXZ1 904 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 I3L521 148 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 K7ESM1 405 aa19.79■□□□□ 0.76
UPF3A-202ENST00000375299 SOCS6O14544 535 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms