RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 KIAA0319Q5VV43 1072 aa9.67□□□□□ -0.86
PTCH1-204ENST00000375290 IFNL1Q8IU54 200 aa9.67□□□□□ -0.86
PTCH1-204ENST00000375290 LPPQ93052 612 aa9.67□□□□□ -0.86
PTCH1-204ENST00000375290 BABAM2Q9NXR7 383 aa9.67□□□□□ -0.86
PTCH1-204ENST00000375290 SLC35A3Q9Y2D2 325 aa9.67□□□□□ -0.86
PTCH1-204ENST00000375290 ARVCFO00192 962 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 PLATP00750 562 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 MAT2AP31153 395 aaKnown RBP9.66□□□□□ -0.86
PTCH1-204ENST00000375290 PDGFRLQ15198 375 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 HIST2H3PS2Q5TEC6 136 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 STEAP3Q658P3 488 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 MAMDC2Q7Z304 686 aaPredicted RBP9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SLC22A15Q8IZD6 547 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 RSC1A1Q92681 617 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SYT17Q9BSW7 474 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 RNF150Q9ULK6 438 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SULT1C4O75897 302 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SBK2P0C263 348 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 TPMTP51580 245 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 PCGF3Q3KNV8 242 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 RNF212Q495C1 297 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 CES4AQ5XG92 561 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 FAM205BPQ63HN1 556 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 ZSCAN4Q8NAM6 433 aaPredicted RBP9.66□□□□□ -0.86
PTCH1-204ENST00000375290 FNDC9Q8TBE3 224 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SRA1Q9HD15 236 aaKnown RBP9.66□□□□□ -0.86
PTCH1-204ENST00000375290 ACOT8O14734 319 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 F10P00742 488 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 GJA1P17302 382 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 TBPP20226 339 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 GCAP28676 217 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 ERVK-21P61565 698 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SPOCK1Q08629 439 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 TMEM150AQ86TG1 271 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 CD163Q86VB7 1156 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 CDRT4Q8N9R6 151 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 OR10G6Q8NH81 332 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SLC7A6Q92536 515 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 TBC1D20Q96BZ9 403 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 TGM7Q96PF1 710 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 OR52A5Q9H2C5 316 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 OR2T1O43869 369 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 OR2F2O95006 317 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 STBD1O95210 358 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 CD1EP15812 388 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 CASRP41180 1078 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 OR2F1Q13607 317 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 WDTC1Q8N5D0 677 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 RAB39BQ96DA2 213 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 IGKV6D-21A0A0A0MT36 114 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 IGKV6-21A0A0C4DH24 114 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 NFKBIEO00221 500 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 RFXAPO00287 272 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SPRED3Q2MJR0 410 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 NXPE4Q6UWF7 544 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 DAZLQ92904 295 aaKnown RBP9.66□□□□□ -0.86
PTCH1-204ENST00000375290 OR51B5Q9H339 312 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 GSKIPQ9P0R6 139 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 CPA4Q9UI42 421 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 E7EQ34 232 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 GOSR2O14653 212 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 EDN1P05305 212 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 RIN1Q13671 783 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 ELAVL3Q14576 367 aaKnown RBP9.66□□□□□ -0.86
PTCH1-204ENST00000375290 NUP43Q8NFH3 380 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 ZNF578Q96N58 590 aaPredicted RBP9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SORCS2Q96PQ0 1159 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 BTBD17A6NE02 478 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SLC34A2O95436 690 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 LCKP06239 509 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 MSR1P21757 451 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SPACA7Q96KW9 195 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SMOQ99835 787 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SSC5DA1L4H1 1573 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 KLRG2A4D1S0 409 aaPredicted RBP9.66□□□□□ -0.86
PTCH1-204ENST00000375290 TMEM212A6NML5 194 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SCGB1D2O95969 90 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 ADORA3P0DMS8 318 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 IL13RA1P78552 427 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SLC7A9P82251 487 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 ZNF266Q14584 549 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 ZNF805Q5CZA5 627 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 FBXO15Q8NCQ5 510 aaPredicted RBP9.66□□□□□ -0.86
PTCH1-204ENST00000375290 TMLHEQ9NVH6 421 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 LRFN1Q9P244 771 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 FBXL4Q9UKA2 621 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 RAF1P04049 648 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 EPHX1P07099 455 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 ATXN8OSP0DMR3 200 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 AK4P27144 223 aaPredicted RBP9.66□□□□□ -0.86
PTCH1-204ENST00000375290 IDH3GP51553 393 aaPredicted RBP9.66□□□□□ -0.86
PTCH1-204ENST00000375290 TMEM185AQ8NFB2 350 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 CLEC4CQ8WTT0 213 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 TXN2Q99757 166 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 NOX3Q9HBY0 568 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 UFSP2Q9NUQ7 469 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 SLC17A6Q9P2U8 582 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 TAC3Q9UHF0 121 aa9.66□□□□□ -0.86
PTCH1-204ENST00000375290 H7BY64 318 aa9.65□□□□□ -0.86
PTCH1-204ENST00000375290 ICMTO60725 284 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms