RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 SLC30A6Q6NXT4 461 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 C1orf94Q6P1W5 598 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 KLBQ86Z14 1044 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 SPRYD4Q8WW59 207 aaPredicted RBP10.41□□□□□ -0.74
CCDC40-203ENST00000374877 ELSPBP1Q96BH3 223 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 WDR34Q96EX3 536 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 SLC35G5Q96KT7 338 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 ISYNA1Q9NPH2 558 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 SIRT3Q9NTG7 399 aaPredicted RBP10.41□□□□□ -0.74
CCDC40-203ENST00000374877 IL20RAQ9UHF4 553 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 ZFR2Q9UPR6 939 aaKnown RBP10.41□□□□□ -0.74
CCDC40-203ENST00000374877 C2orf16Q68DN1 1984 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 KIF26AQ9ULI4 1882 aaPredicted RBP10.41□□□□□ -0.74
CCDC40-203ENST00000374877 FAM170BA6NMN3 283 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 SLC22A5O76082 557 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 UBXN7O94888 489 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 M6PRP20645 277 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 DCDC1P59894 354 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 PRAMEF14Q5SWL7 426 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 PRAMEF13Q5VWM6 474 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 RAET1GQ6H3X3 334 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 KIAA1211LQ6NV74 962 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 RRM2BQ7LG56 351 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 C11orf96Q7Z7L8 435 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 KLHL36Q8N4N3 616 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 ARIH2OSQ8N7S6 290 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 MORN4Q8NDC4 146 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 FGF11Q92914 225 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 UBE2E3Q969T4 207 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 TM4SF18Q96CE8 201 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 TRAF4Q9BUZ4 470 aaPredicted RBP10.41□□□□□ -0.74
CCDC40-203ENST00000374877 QRSL1Q9H0R6 528 aaKnown RBP10.41□□□□□ -0.74
CCDC40-203ENST00000374877 PIGUQ9H490 435 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 ENAMQ9NRM1 1142 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 NUDT15Q9NV35 164 aa10.41□□□□□ -0.74
CCDC40-203ENST00000374877 LAMA3Q16787 3333 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 EEF1E1O43324 174 aaKnown RBP10.4□□□□□ -0.74
CCDC40-203ENST00000374877 FRS3O43559 492 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 SLC19A2O60779 497 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 DHFRP00374 187 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 CISD3P0C7P0 127 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 GSTM3P21266 225 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 PER3P56645 1201 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 TAS2R41P59536 307 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 EFNB1P98172 346 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 RNASE12Q5GAN4 147 aaKnown RBP10.4□□□□□ -0.74
CCDC40-203ENST00000374877 CD300LDQ6UXZ3 194 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 IDO2Q6ZQW0 420 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 TRILQ7L0X0 811 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 ADIPOR2Q86V24 386 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 ETFBKMTQ8IXQ9 262 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 KRT78Q8N1N4 520 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 OR6C4Q8NGE1 309 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 SORCS1Q8WY21 1168 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 UCN3Q969E3 161 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 RFT1Q96AA3 541 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 FAM46AQ96IP4 442 aaKnown RBP10.4□□□□□ -0.74
CCDC40-203ENST00000374877 SECISBP2Q96T21 854 aaKnown RBP10.4□□□□□ -0.74
CCDC40-203ENST00000374877 THAP7Q9BT49 309 aaPredicted RBP10.4□□□□□ -0.74
CCDC40-203ENST00000374877 TTYH1Q9H313 450 aaPredicted RBP10.4□□□□□ -0.74
CCDC40-203ENST00000374877 ZCCHC3Q9NUD5 404 aaKnown RBP10.4□□□□□ -0.74
CCDC40-203ENST00000374877 MRPS18AQ9NVS2 196 aaKnown RBP10.4□□□□□ -0.74
CCDC40-203ENST00000374877 PHF11Q9UIL8 331 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 ITM2BQ9Y287 266 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 CHD9Q3L8U1 2897 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 A0A087WUU8 490 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 SHOXO15266 292 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 HRO43593 1189 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 PDGFAP04085 211 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 ELFN1P0C7U0 828 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 SDHBP21912 280 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 PTBP1P26599 531 aaKnown RBP eCLIP10.4□□□□□ -0.74
CCDC40-203ENST00000374877 SLC6A1P30531 599 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 MAPK9P45984 424 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 POU4F3Q15319 338 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 ENTPD8Q5MY95 495 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 LSRQ86X29 649 aaPredicted RBP10.4□□□□□ -0.74
CCDC40-203ENST00000374877 C7orf57Q8NEG2 295 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 ZNF680Q8NEM1 530 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 PRRC1Q96M27 445 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 MYADMQ96S97 322 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 NRTNQ99748 197 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 OR2AG1Q9H205 316 aa10.4□□□□□ -0.74
CCDC40-203ENST00000374877 MYO10Q9HD67 2058 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 CHST10O43529 356 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 ALPPL2P10696 532 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 PTNP21246 168 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 STOMP27105 288 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 SRP54P61011 504 aaKnown RBP10.4□□□□□ -0.75
CCDC40-203ENST00000374877 DSG2Q14126 1118 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 TANGO2Q6ICL3 276 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 TEX261Q6UWH6 196 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 VITQ6UXI7 678 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 ZNF782Q6ZMW2 699 aaPredicted RBP10.4□□□□□ -0.75
CCDC40-203ENST00000374877 PRICKLE2Q7Z3G6 844 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 FAM20CQ8IXL6 584 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 SAMD12Q8N8I0 201 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 CYB5D2Q8WUJ1 264 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 CHFRQ96EP1 664 aa10.4□□□□□ -0.75
CCDC40-203ENST00000374877 SMAD5Q99717 465 aaKnown RBP10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms