RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 APOFQ13790 326 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 SF3A2Q15428 464 aaKnown RBP13.47□□□□□ -0.25
LMX1B-202ENST00000373474 SGCBQ16585 318 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 BCL2L15Q5TBC7 163 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 LNX2Q8N448 690 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 TEX19Q8NA77 164 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 ZNF419Q96HQ0 510 aaPredicted RBP13.47□□□□□ -0.25
LMX1B-202ENST00000373474 HDHD5Q9BXW7 423 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 SACM1LQ9NTJ5 587 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 ZNF705GA8MUZ8 300 aaPredicted RBP13.47□□□□□ -0.25
LMX1B-202ENST00000373474 TXNL1O43396 289 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 HNRNPA1P09651 372 aaKnown RBP eCLIP13.47□□□□□ -0.25
LMX1B-202ENST00000373474 IFNGR1P15260 489 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 GM2AP17900 193 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 RAB4AP20338 218 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 AK4P27144 223 aaPredicted RBP13.47□□□□□ -0.25
LMX1B-202ENST00000373474 VEGFCP49767 419 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 GAS6Q14393 721 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 PPA1Q15181 289 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 PDSS1Q5T2R2 415 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 FAM69AQ5T7M9 428 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 TMPRSS12Q86WS5 348 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 SVBPQ8N300 66 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 ZFP41Q8N8Y5 198 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 TMEM185AQ8NFB2 350 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 OR9Q2Q8NGE9 314 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 ZDHHC1Q8WTX9 485 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 C3orf30Q96M34 536 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 PLEKHA3Q9HB20 300 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 ZNF701Q9NV72 531 aaPredicted RBP13.47□□□□□ -0.25
LMX1B-202ENST00000373474 TEX10Q9NXF1 929 aaPredicted RBP13.47□□□□□ -0.25
LMX1B-202ENST00000373474 EPHA6Q9UF33 1036 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 MDFIC2A0A1B0GVS7 189 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 H3BUI4 141 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 RTCAO00442 366 aaKnown RBP13.47□□□□□ -0.25
LMX1B-202ENST00000373474 PRAMEF2O60811 474 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 ZNF691Q5VV52 312 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 DCP2Q8IU60 420 aaKnown RBP13.47□□□□□ -0.25
LMX1B-202ENST00000373474 DTX3Q8N9I9 347 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 MYLIPQ8WY64 445 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 SH3YL1Q96HL8 342 aaPredicted RBP13.47□□□□□ -0.25
LMX1B-202ENST00000373474 DPH7Q9BTV6 452 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 PTTG3PQ9NZH4 202 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 C9J4A7 227 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 RNGTTO60942 597 aaKnown RBP13.47□□□□□ -0.25
LMX1B-202ENST00000373474 ADAMTS19Q8TE59 1207 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 SYT3Q9BQG1 590 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 NTMT1Q9BV86 223 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 COQ3Q9NZJ6 369 aa13.47□□□□□ -0.25
LMX1B-202ENST00000373474 LOC285095A0A1B0GVY8 99 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 A8MU76 341 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 VSTM5A8MXK1 200 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 PHYHO14832 338 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 PYCR1P32322 319 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 ADRA1AP35348 466 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 GGT2P36268 569 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 FKBP10Q96AY3 582 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 WDR92Q96MX6 357 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 RBCK1Q9BYM8 510 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 SLC2A4RGQ9NR83 387 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 IL17CQ9P0M4 197 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 SERTAD3Q9UJW9 196 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 PLCH1Q4KWH8 1693 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 MBLAC1A4D2B0 266 aaPredicted RBP13.46□□□□□ -0.25
LMX1B-202ENST00000373474 KCNJ13O60928 360 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 CASRP41180 1078 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 ARL6IP1Q15041 203 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 KIAA0319Q5VV43 1072 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 C3P1Q6ZMU1 363 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 SLC7A5P1Q8MH63 180 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 MMABQ96EY8 250 aaPredicted RBP13.46□□□□□ -0.25
LMX1B-202ENST00000373474 SGIP1Q9BQI5 828 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 MRI1Q9BV20 369 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 OR8D2Q9GZM6 311 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 VAPAQ9P0L0 249 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 IRS2Q9Y4H2 1338 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 C17orf113A0A1B0GUU1 675 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 C11orf98E9PRG8 122 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 MT-CO2P00403 227 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 HOXB9P17482 250 aaPredicted RBP13.46□□□□□ -0.25
LMX1B-202ENST00000373474 POLR2HP52434 150 aaKnown RBP13.46□□□□□ -0.25
LMX1B-202ENST00000373474 CRYZQ08257 329 aaKnown RBP13.46□□□□□ -0.25
LMX1B-202ENST00000373474 IER5LQ5T953 404 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 GPR149Q86SP6 731 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 IL26Q9NPH9 171 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 C19orf25Q9UFG5 118 aaPredicted RBP13.46□□□□□ -0.25
LMX1B-202ENST00000373474 YARS2Q9Y2Z4 477 aaKnown RBP13.46□□□□□ -0.25
LMX1B-202ENST00000373474 AP1M2Q9Y6Q5 423 aa13.46□□□□□ -0.25
LMX1B-202ENST00000373474 SPDEFO95238 335 aa13.46□□□□□ -0.26
LMX1B-202ENST00000373474 PTPN6P29350 595 aa13.46□□□□□ -0.26
LMX1B-202ENST00000373474 PRDX3P30048 256 aaKnown RBP13.46□□□□□ -0.26
LMX1B-202ENST00000373474 CPOXP36551 454 aa13.46□□□□□ -0.26
LMX1B-202ENST00000373474 ELAVL3Q14576 367 aaKnown RBP13.46□□□□□ -0.26
LMX1B-202ENST00000373474 ZNF440Q8IYI8 595 aa13.46□□□□□ -0.26
LMX1B-202ENST00000373474 IQCF1Q8N6M8 205 aa13.46□□□□□ -0.26
LMX1B-202ENST00000373474 OR4K5Q8NGD3 323 aa13.46□□□□□ -0.26
LMX1B-202ENST00000373474 ACTRT3Q9BYD9 372 aa13.46□□□□□ -0.26
LMX1B-202ENST00000373474 UBE2J1Q9Y385 318 aaPredicted RBP13.46□□□□□ -0.26
LMX1B-202ENST00000373474 A0A1W2PP55 124 aa13.45□□□□□ -0.26
LMX1B-202ENST00000373474 FAM230AA0A1W2PPH8 454 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms