RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 OR2AG1Q9H205 316 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 DDX31Q9H8H2 851 aaKnown RBP12.86□□□□□ -0.35
USP49-201ENST00000373006 MRPS18AQ9NVS2 196 aaKnown RBP12.86□□□□□ -0.35
USP49-201ENST00000373006 BACE2Q9Y5Z0 518 aa12.86□□□□□ -0.35
USP49-201ENST00000373006 CPSF4LA6NMK7 179 aaKnown RBP12.85□□□□□ -0.35
USP49-201ENST00000373006 NEDD8-MDP1E9PL57 170 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 UBXN7O94888 489 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 ALDH1A1P00352 501 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 DHFRP00374 187 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 RB1P06400 928 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 TRIM23P36406 574 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 ZNF81P51508 661 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 OR10A3P58181 314 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 RGS1Q08116 209 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 DUSP6Q16828 381 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 EOGTQ5NDL2 527 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 MTFR2Q6P444 385 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 TMEM107Q6UX40 140 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 CD300LDQ6UXZ3 194 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 LIPIQ6XZB0 460 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.85□□□□□ -0.35
USP49-201ENST00000373006 IKBIPQ70UQ0 350 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 TIFAQ96CG3 184 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 ZG16BQ96DA0 208 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 ABHD1Q96SE0 405 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 ELAC1Q9H777 363 aaKnown RBP12.85□□□□□ -0.35
USP49-201ENST00000373006 SLCO1C1Q9NYB5 712 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 P2RX2Q9UBL9 471 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 SRRDQ9UH36 339 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 ADAM30Q9UKF2 790 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 SIRT4Q9Y6E7 314 aaPredicted RBP12.85□□□□□ -0.35
USP49-201ENST00000373006 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.85□□□□□ -0.35
USP49-201ENST00000373006 ZC3H12DA2A288 527 aaKnown RBP12.85□□□□□ -0.35
USP49-201ENST00000373006 SERPIND1P05546 499 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 TIMP2P16035 220 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 STOMP27105 288 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 SHC1P29353 583 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 TALDO1P37837 337 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 ARHGDIBP52566 201 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 DCDC1P59894 354 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 NDUFA9Q16795 377 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 RRM2BQ7LG56 351 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 KLHL36Q8N4N3 616 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 OR51G2Q8NGK0 314 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 HSD17B8Q92506 261 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 MARC2Q969Z3 335 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 WDR34Q96EX3 536 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 FCRL4Q96PJ5 515 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 C11orf49Q9H6J7 331 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 C12orf10Q9HB07 376 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 ISYNA1Q9NPH2 558 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 MRPL17Q9NRX2 175 aaKnown RBP12.85□□□□□ -0.35
USP49-201ENST00000373006 ZCCHC3Q9NUD5 404 aaKnown RBP12.85□□□□□ -0.35
USP49-201ENST00000373006 K7ESM1 405 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 TMPRSS11DO60235 418 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 SLC19A2O60779 497 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 RAF1P04049 648 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 BTCP35070 178 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 TAS2R41P59536 307 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 PIP5KL1Q5T9C9 394 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 KIAA1324Q6UXG2 1013 aaKnown RBP12.85□□□□□ -0.35
USP49-201ENST00000373006 ZNF782Q6ZMW2 699 aaPredicted RBP12.85□□□□□ -0.35
USP49-201ENST00000373006 ANKRD53Q8N9V6 530 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 HEXA-AS1Q9H8Q6 139 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 NEUROD4Q9HD90 331 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 NUP50Q9UKX7 468 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 NTNG1Q9Y2I2 539 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 CACNG2Q9Y698 323 aa12.85□□□□□ -0.35
USP49-201ENST00000373006 LINC00862A6NCI5 91 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 SOCS6O14544 535 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 PROS1P07225 676 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 CHRM4P08173 479 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 CD3GP09693 182 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 GPR4P46093 362 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 RIN1Q13671 783 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 DSG2Q14126 1118 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 BHLHB9Q6PI77 547 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 HTR3DQ70Z44 454 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 LRRC56Q8IYG6 542 aaPredicted RBP12.84□□□□□ -0.35
USP49-201ENST00000373006 FBXO15Q8NCQ5 510 aaPredicted RBP12.84□□□□□ -0.35
USP49-201ENST00000373006 OR4Q3Q8NH05 313 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 IGSF21Q96ID5 467 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 SLC35G5Q96KT7 338 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 GHITMQ9H3K2 345 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 CUEDC1Q9NWM3 386 aaPredicted RBP12.84□□□□□ -0.35
USP49-201ENST00000373006 RASD1Q9Y272 281 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 TEX13CA0A0J9YWL9 993 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 A0A1W2PRU2 124 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 TRIM77I1YAP6 450 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 GRM6O15303 877 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 HK1P19367 917 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 PPP2R1BP30154 601 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 CCR6P51684 374 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 PCBP4P57723 403 aaKnown RBP12.84□□□□□ -0.35
USP49-201ENST00000373006 PRAMEF14Q5SWL7 426 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 CLVS2Q5SYC1 327 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 PRAMEF13Q5VWM6 474 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 KHDRBS2Q5VWX1 349 aaKnown RBP12.84□□□□□ -0.35
USP49-201ENST00000373006 KIAA1211LQ6NV74 962 aa12.84□□□□□ -0.35
USP49-201ENST00000373006 CD99L2Q8TCZ2 262 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms