RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 MGAT4AQ9UM21 535 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 FARS2O95363 451 aaKnown RBP11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 MTHFD2P13995 350 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 RIDAP52758 137 aaKnown RBP11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 NTRK2Q16620 822 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 SLC25A25Q6KCM7 469 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 SLCO4C1Q6ZQN7 724 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 LKAAEAR1Q8TD35 194 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 ZDHHC1Q8WTX9 485 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 CACNG6Q9BXT2 260 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 OR2B2Q9GZK3 357 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 MCCC2Q9HCC0 563 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 CNIH4Q9P003 139 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 A0A0J9YY10 115 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 CD97P48960 835 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 PRKCDQ05655 676 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 ZNF852Q6ZMS4 543 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 FAM83HQ6ZRV2 1179 aaPredicted RBP11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 TMEM173Q86WV6 379 aaPredicted RBP11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 ZNF283Q8N7M2 679 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 ZNF615Q8N8J6 731 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 GTPBP2Q9BX10 602 aaKnown RBP11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 SORBS1Q9BX66 1292 aaKnown RBP11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 TAS2R8Q9NYW2 309 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 PPP4R1LQ9P1A2 415 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 ASB4Q9Y574 426 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 NHSQ6T4R5 1651 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 APOC1P02654 83 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 CA5AP35218 305 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 P2RY2P41231 377 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 CLRN1P58418 232 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 CCINQ13939 588 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 NSDHLQ15738 373 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 GPAT4Q86UL3 456 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 SYT14Q8NB59 555 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 OR5K2Q8NHB8 316 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 DOK4Q8TEW6 326 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 SGCDQ92629 289 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 LPAR4Q99677 370 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 ASIC5Q9NY37 505 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 DNMT3BQ9UBC3 853 aaKnown RBP11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 EVPLQ92817 2033 aa11.19□□□□□ -0.62
DEPDC1-201ENST00000370966 FUOMA2VDF0 154 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 VSTM2BA6NLU5 285 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 CHP2O43745 196 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 ZNF888P0CJ79 500 aaPredicted RBP11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 PNMTP11086 282 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 GLP1RP43220 463 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 RGS6P49758 472 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 CTXN1P60606 82 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 RTN4RL1Q86UN2 441 aaPredicted RBP11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 OR5D16Q8NGK9 328 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 ADAMTS19Q8TE59 1207 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 BEX2Q9BXY8 128 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 ALOXE3Q9BYJ1 711 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 KATNBL1Q9H079 304 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 BEX1Q9HBH7 125 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 DKKL1Q9UK85 242 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 CLEC4EQ9ULY5 219 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 C14orf166Q9Y224 244 aaKnown RBP11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 MAB21L2Q9Y586 359 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 PHIPQ8WWQ0 1821 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 A0A1W2PPK0 400 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 CLDN24A6NM45 220 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 M0R233 179 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 GTF2F2P13984 249 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 HMGA1P17096 107 aaKnown RBP11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 GIPRP48546 466 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 SLC22A10Q63ZE4 541 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 LRFN4Q6PJG9 635 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 IQCF2Q8IXL9 164 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 URM1Q9BTM9 101 aaKnown RBP11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 DPH1Q9BZG8 443 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 SLC7A7Q9UM01 511 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 TOGARAM1Q9Y4F4 1720 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 MEGF11A6BM72 1044 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 H3BSH0 61 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 CACNG3O60359 315 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 UPK1BO75841 260 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 TRAPPC6AO75865 159 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 ZNF81P51508 661 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 SGSHP51688 502 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 PLGLB1Q02325 96 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 IRF4Q15306 451 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 XKR7Q5GH72 579 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 PLPP6Q8IY26 295 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 SPAG16Q8N0X2 631 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 OLIG1Q8TAK6 271 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 SLC22A8Q8TCC7 542 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 UHRF1Q96T88 793 aaPredicted RBP11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 MRI1Q9BV20 369 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 ALG8Q9BVK2 526 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 IRF2BPLQ9H1B7 796 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 B3GNT3Q9Y2A9 372 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 ALG5Q9Y673 324 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 TEX13DA0A0J9YY54 714 aaPredicted RBP11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 I3L521 148 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 SLCO2B1O94956 709 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 H2AFB2P0C5Z0 115 aa11.18□□□□□ -0.62
DEPDC1-201ENST00000370966 GKN3PP0CG01 181 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms