RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 FAM69AQ5T7M9 428 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 REP15Q6BDI9 236 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 ABLIM2Q6H8Q1 611 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 OR4F3Q6IEY1 312 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 SLC2A7Q6PXP3 512 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 DLEU7Q6UYE1 221 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 RAB11FIP2Q7L804 512 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 PAGE2Q7Z2X7 111 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 SZRD1Q7Z422 152 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 NUDT13Q86X67 352 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 KMT5CQ86Y97 462 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 DSELQ8IZU8 1212 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 ZCCHC7Q8N3Z6 543 aaKnown RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 OR5T3Q8NGG3 340 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 OR9A4Q8NGU2 314 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 RERGQ96A58 199 aaPredicted RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 MIEF2Q96C03 454 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 COQ8BQ96D53 544 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 RNF31Q96EP0 1072 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 AJUBAQ96IF1 538 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 C10orf90Q96M02 699 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 GFM1Q96RP9 751 aaKnown RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 BTBD10Q9BSF8 475 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 MRI1Q9BV20 369 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 SLC25A23Q9BV35 468 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 SPATA5L1Q9BVQ7 753 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 CADM1Q9BY67 442 aaKnown RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 KRTAP3-1Q9BYR8 98 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 SLC25A18Q9H1K4 315 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 MEGF9Q9H1U4 602 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 LRMDAQ9H2I8 198 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 REEP4Q9H6H4 257 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 SYNDIG1Q9H7V2 258 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 SLC6A13Q9NSD5 602 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 TXLNGQ9NUQ3 528 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 JKAMPQ9P055 326 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 SLC22A7Q9Y694 548 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 GVINP1Q7Z2Y8 2422 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 COL5A1P20908 1838 aaPredicted RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 CROCCQ5TZA2 2017 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 SCN2AQ99250 2005 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 KIF26BQ2KJY2 2108 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 A0A0A6YYC8 382 aaPredicted RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 A0A1W2PS29 197 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 HYKKA2RU49 373 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 TMEM150CB9EJG8 249 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 D6RAR5 112 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 PROB1E7EW31 1015 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 I3L1I5 382 aaPredicted RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 SGK494L7N484 410 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 MRASO14807 208 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 CFLARO15519 480 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 ZSCAN9O15535 394 aaPredicted RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 ZNF749O43361 778 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 PROM1O43490 865 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 GALR3O60755 368 aaPredicted RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 ATP5HO75947 161 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 C1QCP02747 245 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 IL6P05231 212 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 GP1BAP07359 652 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 ANKRD34CP0C6C1 535 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 ZNF20P17024 532 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 HOXB9P17482 250 aaPredicted RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 IL1RNP18510 177 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 PTPN6P29350 595 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 S100A3P33764 101 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 CDKN2CP42773 168 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 ASMTP46597 345 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 MTTPP55157 894 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 KCNK10P57789 538 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 TRA2BP62995 288 aaKnown RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 KCNJ2P63252 427 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 KLC1Q07866 573 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 ACTN3Q08043 901 aaPredicted RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 STX5Q13190 355 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 DCTN2Q13561 401 aaKnown RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 C16orf72Q14CZ0 275 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 MAPRE2Q15555 327 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 CLPPQ16740 277 aaPredicted RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 RNF151Q2KHN1 245 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 ZNF750Q32MQ0 723 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 NRN1LQ496H8 165 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 AASDHQ4L235 1098 aaPredicted RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 CPTPQ5TA50 214 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 STPG1Q5TH74 334 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 C18orf63Q68DL7 685 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 C8orf82Q6P1X6 216 aaPredicted RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 TRIM40Q6P9F5 258 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 SEM1Q6ZVN7 128 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 CXXC5Q7LFL8 322 aaKnown RBP3.32□□□□□ -1.88
MCF2-202ENST00000370573 ASCL5Q7RTU5 278 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 PPP1R32Q7Z5V6 425 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 CAMKMTQ7Z624 323 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 GPR180Q86V85 440 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 KRT73Q86Y46 540 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 TICAM1Q8IUC6 712 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 MSRB3Q8IXL7 192 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 C10orf67Q8IYJ2 551 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 CA13Q8N1Q1 262 aa3.32□□□□□ -1.88
MCF2-202ENST00000370573 TMEM132CQ8N3T6 1108 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms