RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 IL12BP29460 328 aa13.78□□□□□ -0.2
SSR4-204ENST00000370087 EVI2BP34910 448 aa13.78□□□□□ -0.2
SSR4-204ENST00000370087 SRSF2Q01130 221 aaKnown RBP13.78□□□□□ -0.2
SSR4-204ENST00000370087 EFR3AQ14156 821 aa13.78□□□□□ -0.2
SSR4-204ENST00000370087 FGFBP1Q14512 234 aa13.78□□□□□ -0.2
SSR4-204ENST00000370087 CTU2Q2VPK5 515 aaKnown RBP13.78□□□□□ -0.2
SSR4-204ENST00000370087 SGO1Q5FBB7 561 aa13.78□□□□□ -0.2
SSR4-204ENST00000370087 FRG2Q64ET8 278 aa13.78□□□□□ -0.2
SSR4-204ENST00000370087 ALKBH2Q6NS38 261 aa13.78□□□□□ -0.2
SSR4-204ENST00000370087 CTAGE3PQ8IX95 158 aa13.78□□□□□ -0.2
SSR4-204ENST00000370087 OR9A2Q8NGT5 310 aa13.78□□□□□ -0.2
SSR4-204ENST00000370087 NSUN5Q96P11 429 aaKnown RBP13.78□□□□□ -0.2
SSR4-204ENST00000370087 FRG2BQ96QU4 278 aa13.78□□□□□ -0.2
SSR4-204ENST00000370087 FOLH1BQ9HBA9 442 aa13.78□□□□□ -0.2
SSR4-204ENST00000370087 ZBTB26Q9HCK0 441 aa13.78□□□□□ -0.2
SSR4-204ENST00000370087 PLSCR4Q9NRQ2 329 aa13.78□□□□□ -0.2
SSR4-204ENST00000370087 CPSF2Q9P2I0 782 aaKnown RBP13.78□□□□□ -0.2
SSR4-204ENST00000370087 GDF2Q9UK05 429 aaPredicted RBP13.78□□□□□ -0.2
SSR4-204ENST00000370087 ACOT9Q9Y305 439 aa13.78□□□□□ -0.2
SSR4-204ENST00000370087 SYCE1LA8MT33 242 aa13.77□□□□□ -0.21
SSR4-204ENST00000370087 CCDC188H7C350 402 aa13.77□□□□□ -0.21
SSR4-204ENST00000370087 SPRP35270 261 aaPredicted RBP13.77□□□□□ -0.21
SSR4-204ENST00000370087 ALDH9A1P49189 494 aa13.77□□□□□ -0.21
SSR4-204ENST00000370087 OCRLQ01968 901 aa13.77□□□□□ -0.21
SSR4-204ENST00000370087 TRAF3Q13114 568 aa13.77□□□□□ -0.21
SSR4-204ENST00000370087 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.77□□□□□ -0.21
SSR4-204ENST00000370087 CHRFAM7AQ494W8 412 aa13.77□□□□□ -0.21
SSR4-204ENST00000370087 GRTP1Q5TC63 336 aa13.77□□□□□ -0.21
SSR4-204ENST00000370087 PPM1NQ8N819 430 aa13.77□□□□□ -0.21
SSR4-204ENST00000370087 OR6K3Q8NGY3 331 aa13.77□□□□□ -0.21
SSR4-204ENST00000370087 RHEBL1Q8TAI7 183 aa13.77□□□□□ -0.21
SSR4-204ENST00000370087 ZNF675Q8TD23 568 aa13.77□□□□□ -0.21
SSR4-204ENST00000370087 GPR78Q96P69 363 aa13.77□□□□□ -0.21
SSR4-204ENST00000370087 A0A096LNT2 108 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 HMX2A2RU54 273 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 A8MV72 311 aaPredicted RBP13.76□□□□□ -0.21
SSR4-204ENST00000370087 FADS1O60427 444 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 SS18L1O75177 396 aaPredicted RBP13.76□□□□□ -0.21
SSR4-204ENST00000370087 CRABP2P29373 138 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 IDUAP35475 653 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 ARL1P40616 181 aaPredicted RBP13.76□□□□□ -0.21
SSR4-204ENST00000370087 PNLIPRP2P54317 469 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 EEFSECP57772 596 aaKnown RBP13.76□□□□□ -0.21
SSR4-204ENST00000370087 FAPQ12884 760 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 TSC22D1Q15714 1073 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 ETFDHQ16134 617 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 PPP4R4Q6NUP7 873 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 ADAM5Q6NVV9 412 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 C3orf62Q6ZUJ4 267 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 RPS27LQ71UM5 84 aaKnown RBP13.76□□□□□ -0.21
SSR4-204ENST00000370087 PAGE2Q7Z2X7 111 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 CREG2Q8IUH2 290 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 SLC44A2Q8IWA5 706 aaPredicted RBP13.76□□□□□ -0.21
SSR4-204ENST00000370087 CCDC116Q8IYX3 515 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 C1GALT1C1Q96EU7 318 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 NPAS1Q99742 590 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 SLC12A4Q9UP95 1085 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 LIPT1Q9Y234 373 aa13.76□□□□□ -0.21
SSR4-204ENST00000370087 CLOCKO15516 846 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 GMFGO60234 142 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 C2P06681 752 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 FAM157CP0CG43 387 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 CKAP4Q07065 602 aaKnown RBP13.75□□□□□ -0.21
SSR4-204ENST00000370087 GANABQ14697 944 aaKnown RBP13.75□□□□□ -0.21
SSR4-204ENST00000370087 TMEM44Q2T9K0 475 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 PGGHGQ32M88 737 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 C6orf52Q5T4I8 152 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 SEZ6L2Q6UXD5 910 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 PTGR2Q8N8N7 351 aaPredicted RBP13.75□□□□□ -0.21
SSR4-204ENST00000370087 KBTBD8Q8NFY9 601 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 OR7G2Q8NG99 324 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 TRPC4APQ8TEL6 797 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 FBXW5Q969U6 566 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 S100PBPQ96BU1 408 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 DTNBP1Q96EV8 351 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 TRMT61AQ96FX7 289 aaKnown RBP13.75□□□□□ -0.21
SSR4-204ENST00000370087 HBEGFQ99075 208 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 STMN4Q9H169 189 aaPredicted RBP13.75□□□□□ -0.21
SSR4-204ENST00000370087 AHSPQ9NZD4 102 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 PCTPQ9UKL6 214 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 UTS2RQ9UKP6 389 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 EMC9Q9Y3B6 208 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 RNF115Q9Y4L5 304 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 ZNF780BQ9Y6R6 833 aa13.75□□□□□ -0.21
SSR4-204ENST00000370087 IGHV4-30-2A0A087WSY4 118 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 PPP6CO00743 305 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 NTN1O95631 604 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 PDYNP01213 254 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 OPN1LWP04000 364 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 FCGR2AP12318 317 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 KRT20P35900 424 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 EIF1AXP47813 144 aaKnown RBP13.74□□□□□ -0.21
SSR4-204ENST00000370087 CCNG1P51959 295 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 PSG6Q00889 435 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 SGCBQ16585 318 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 TECRLQ5HYJ1 363 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 LGSNQ5TDP6 509 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 TTC19Q6DKK2 380 aaPredicted RBP13.74□□□□□ -0.21
SSR4-204ENST00000370087 CYS1Q717R9 158 aa13.74□□□□□ -0.21
SSR4-204ENST00000370087 MILR1Q7Z6M3 343 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms