RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 SAXO2Q658L1 398 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 DNAJC14Q6Y2X3 702 aaPredicted RBP12.64□□□□□ -0.39
SSR4-202ENST00000370085 BNC2Q6ZN30 1099 aaPredicted RBP12.64□□□□□ -0.39
SSR4-202ENST00000370085 C16orf62Q7Z3J2 963 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 FUNDC1Q8IVP5 155 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 ZNF527Q8NB42 609 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 ZFP62Q8NB50 900 aaPredicted RBP12.64□□□□□ -0.39
SSR4-202ENST00000370085 OR4N2Q8NGD1 307 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 MIPOL1Q8TD10 442 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 PIK3R3Q92569 461 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 NR4A3Q92570 626 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 GTF2H4Q92759 462 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 FRMD6Q96NE9 622 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 OR7D2Q96RA2 312 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 INPP5KQ9BT40 448 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 OSBPL11Q9BXB4 747 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 ANGPTL4Q9BY76 406 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 HOXD1Q9GZZ0 328 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 ZNF385DQ9H6B1 395 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 IL1RL2Q9HB29 575 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 ASF1BQ9NVP2 202 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 CNOT11Q9UKZ1 510 aaKnown RBP12.64□□□□□ -0.39
SSR4-202ENST00000370085 CORO2BQ9UQ03 480 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 CAPN7Q9Y6W3 813 aa12.64□□□□□ -0.39
SSR4-202ENST00000370085 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.64□□□□□ -0.39
SSR4-202ENST00000370085 EML6Q6ZMW3 1958 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 NINQ8N4C6 2090 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 NBASA2RRP1 2371 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 KCNK2O95069 426 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 GSNP06396 782 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 DRD4P21917 467 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 CASP3P42574 277 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 ZFP36L2P47974 494 aaKnown RBP12.63□□□□□ -0.39
SSR4-202ENST00000370085 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.63□□□□□ -0.39
SSR4-202ENST00000370085 KRTCAP3Q53RY4 240 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 DCST2Q5T1A1 773 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 SLC2A7Q6PXP3 512 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 CDS1Q92903 461 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 HGDQ93099 445 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 JSRP1Q96MG2 331 aaPredicted RBP12.63□□□□□ -0.39
SSR4-202ENST00000370085 PHF12Q96QT6 1004 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 TBL1XR1Q9BZK7 514 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 OR51I1Q9H343 314 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 ZFP64Q9NPA5 681 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 SERHLQ9NQF3 203 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 SAR1AQ9NR31 198 aa12.63□□□□□ -0.39
SSR4-202ENST00000370085 GXYLT2A0PJZ3 443 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 BBIP1A8MTZ0 92 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 EVPLLA8MZ36 301 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 G3V3Y1 287 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 H3BNH8 94 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 SCDO00767 359 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 SNX3O60493 162 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 STX11O75558 287 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 CYP4B1P13584 511 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 EDN3P14138 238 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 CAPN3P20807 821 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 ENDOUP21128 410 aaKnown RBP12.62□□□□□ -0.39
SSR4-202ENST00000370085 EVI2BP34910 448 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 CDKN2CP42773 168 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 CRATP43155 626 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 DNASE1L1P49184 302 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 MAN2A2P49641 1150 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 RPS26P62854 115 aaKnown RBP12.62□□□□□ -0.39
SSR4-202ENST00000370085 PPIAP62937 165 aaKnown RBP12.62□□□□□ -0.39
SSR4-202ENST00000370085 PMP22Q01453 160 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 RBPJQ06330 500 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 STX5Q13190 355 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 GNA13Q14344 377 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 EXOSC6Q5RKV6 272 aaKnown RBP12.62□□□□□ -0.39
SSR4-202ENST00000370085 TNFAIP8L2Q6P589 184 aaPredicted RBP12.62□□□□□ -0.39
SSR4-202ENST00000370085 FIGNL1Q6PIW4 674 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 RNF130Q86XS8 419 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 CLEC4FQ8N1N0 589 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 PCYOX1LQ8NBM8 494 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 GALNT11Q8NCW6 608 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 OR1J4Q8NGS1 313 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 XAGE5Q8WWM1 108 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 TMEM41AQ96HV5 264 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 TAAR6Q96RI8 345 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 TTTY12Q9BZ98 90 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 TRIM4Q9C037 500 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 TPT1P8Q9HAU6 139 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 POLE3Q9NRF9 147 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 UBQLN4Q9NRR5 601 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 DEPPQ9NTK1 212 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 FAM53CQ9NYF3 392 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.62□□□□□ -0.39
SSR4-202ENST00000370085 LIPT1Q9Y234 373 aa12.62□□□□□ -0.39
SSR4-202ENST00000370085 ICOSLGO75144 302 aa12.61□□□□□ -0.39
SSR4-202ENST00000370085 UTS2O95399 124 aa12.61□□□□□ -0.39
SSR4-202ENST00000370085 NGFRP08138 427 aa12.61□□□□□ -0.39
SSR4-202ENST00000370085 OR12D1P0DN82 309 aa12.61□□□□□ -0.39
SSR4-202ENST00000370085 GCKP35557 465 aa12.61□□□□□ -0.39
SSR4-202ENST00000370085 KLF10Q13118 480 aa12.61□□□□□ -0.39
SSR4-202ENST00000370085 FADDQ13158 208 aa12.61□□□□□ -0.39
SSR4-202ENST00000370085 CYLC2Q14093 348 aaPredicted RBP12.61□□□□□ -0.39
SSR4-202ENST00000370085 UBAP2LQ14157 1087 aaKnown RBP12.61□□□□□ -0.39
SSR4-202ENST00000370085 ARHGAP11BQ3KRB8 267 aa12.61□□□□□ -0.39
SSR4-202ENST00000370085 FLYWCH1Q4VC44 716 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms