RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 GSTO2Q9H4Y5 243 aa14.48□□□□□ -0.09
CKS1B-202ENST00000368436 BEX4Q9NWD9 120 aaPredicted RBP14.48□□□□□ -0.09
CKS1B-202ENST00000368436 TAS2R7Q9NYW3 318 aa14.48□□□□□ -0.09
CKS1B-202ENST00000368436 NDRG3Q9UGV2 375 aa14.48□□□□□ -0.09
CKS1B-202ENST00000368436 GRID1Q9ULK0 1009 aa14.48□□□□□ -0.09
CKS1B-202ENST00000368436 OR10H1Q9Y4A9 318 aa14.48□□□□□ -0.09
CKS1B-202ENST00000368436 VPS13CQ709C8 3753 aa14.48□□□□□ -0.09
CKS1B-202ENST00000368436 UBFD1O14562 309 aaKnown RBP14.47□□□□□ -0.09
CKS1B-202ENST00000368436 CASKO14936 926 aa14.47□□□□□ -0.09
CKS1B-202ENST00000368436 COQ9O75208 318 aa14.47□□□□□ -0.09
CKS1B-202ENST00000368436 PSMG1O95456 288 aa14.47□□□□□ -0.09
CKS1B-202ENST00000368436 GSTA1P08263 222 aa14.47□□□□□ -0.09
CKS1B-202ENST00000368436 CLDN15P56746 228 aa14.47□□□□□ -0.09
CKS1B-202ENST00000368436 ZNF763Q0D2J5 394 aa14.47□□□□□ -0.09
CKS1B-202ENST00000368436 CYP27C1Q4G0S4 372 aa14.47□□□□□ -0.09
CKS1B-202ENST00000368436 FAM71E1Q6IPT2 247 aa14.47□□□□□ -0.09
CKS1B-202ENST00000368436 TRMT10CQ7L0Y3 403 aaKnown RBP14.47□□□□□ -0.09
CKS1B-202ENST00000368436 KRTAP1-3Q8IUG1 177 aa14.47□□□□□ -0.09
CKS1B-202ENST00000368436 BBS4Q96RK4 519 aa14.47□□□□□ -0.09
CKS1B-202ENST00000368436 NEUROD4Q9HD90 331 aa14.47□□□□□ -0.09
CKS1B-202ENST00000368436 SDHAF3Q9NRP4 125 aa14.47□□□□□ -0.09
CKS1B-202ENST00000368436 SENP1Q9P0U3 644 aa14.47□□□□□ -0.09
CKS1B-202ENST00000368436 PPP4R1LQ9P1A2 415 aa14.47□□□□□ -0.09
CKS1B-202ENST00000368436 C19orf53Q9UNZ5 99 aaPredicted RBP14.47□□□□□ -0.09
CKS1B-202ENST00000368436 WBP11Q9Y2W2 641 aaKnown RBP14.47□□□□□ -0.09
CKS1B-202ENST00000368436 TESMINQ9Y4I5 508 aa14.47□□□□□ -0.09
CKS1B-202ENST00000368436 SLC22A20A6NK97 555 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 GOLGA8RI6L899 631 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 RIPK2O43353 540 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 SCO2O43819 266 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 JUNP05412 331 aaKnown RBP14.46□□□□□ -0.09
CKS1B-202ENST00000368436 TCEA1P23193 301 aaKnown RBP14.46□□□□□ -0.09
CKS1B-202ENST00000368436 NCBP2P52298 156 aaKnown RBP eCLIP14.46□□□□□ -0.09
CKS1B-202ENST00000368436 FOXA1P55317 472 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 EEFSECP57772 596 aaKnown RBP14.46□□□□□ -0.09
CKS1B-202ENST00000368436 FAM27E3Q08E93 113 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 ZNF155Q12901 538 aaPredicted RBP14.46□□□□□ -0.09
CKS1B-202ENST00000368436 GANABQ14697 944 aaKnown RBP14.46□□□□□ -0.09
CKS1B-202ENST00000368436 SPDYAQ5MJ70 313 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 CHMP1BQ7LBR1 199 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 P4HA3Q7Z4N8 544 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 CXorf67Q86X51 503 aaPredicted RBP14.46□□□□□ -0.09
CKS1B-202ENST00000368436 OR2L13Q8N349 312 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 FAM76AQ8TAV0 307 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 MZB1Q8WU39 189 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 RTN4RQ9BZR6 473 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 MID1IP1Q9NPA3 183 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 MYNNQ9NPC7 610 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 FLRT3Q9NZU0 649 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 DCDC2Q9UHG0 476 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 ABCG2Q9UNQ0 655 aa14.46□□□□□ -0.09
CKS1B-202ENST00000368436 NAV3Q8IVL0 2385 aa14.46□□□□□ -0.1
CKS1B-202ENST00000368436 LINC01387J3KSC0 135 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 UPK1AO00322 258 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 TNFRSF21O75509 655 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 IFI6P09912 130 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 PYGBP11216 843 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 HK1P19367 917 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 CPOXP36551 454 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 CD79BP40259 229 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 MC3RP41968 323 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 KIR2DL2P43627 348 aaPredicted RBP14.45□□□□□ -0.1
CKS1B-202ENST00000368436 SUCLG1P53597 346 aaKnown RBP14.45□□□□□ -0.1
CKS1B-202ENST00000368436 VWA1Q6PCB0 445 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 TMEM107Q6UX40 140 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 TRIM46Q7Z4K8 759 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 BTLAQ7Z6A9 289 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 BIVMQ86UB2 503 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 UBQLNLQ8IYU4 475 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 CNPY4Q8N129 248 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 MEIOBQ8N635 442 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 FIG4Q92562 907 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 ZNF592Q92610 1267 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 ELP4Q96EB1 424 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 CCDC126Q96EE4 140 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 WFIKKN1Q96NZ8 548 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 LMF2Q9BU23 707 aaKnown RBP14.45□□□□□ -0.1
CKS1B-202ENST00000368436 GLIPR2Q9H4G4 154 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 MIEF1Q9NQG6 463 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 FAM120CQ9NX05 1096 aaKnown RBP14.45□□□□□ -0.1
CKS1B-202ENST00000368436 MED11Q9P086 117 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 EMCNQ9ULC0 261 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 EIF3LQ9Y262 564 aaKnown RBP14.45□□□□□ -0.1
CKS1B-202ENST00000368436 ZNF337Q9Y3M9 751 aa14.45□□□□□ -0.1
CKS1B-202ENST00000368436 G3V2L1 256 aa14.44□□□□□ -0.1
CKS1B-202ENST00000368436 H3BQF6 201 aa14.44□□□□□ -0.1
CKS1B-202ENST00000368436 CTIFO43310 598 aaKnown RBP14.44□□□□□ -0.1
CKS1B-202ENST00000368436 IL33O95760 270 aa14.44□□□□□ -0.1
CKS1B-202ENST00000368436 CGAP01215 116 aa14.44□□□□□ -0.1
CKS1B-202ENST00000368436 NKX6-1P78426 367 aaPredicted RBP14.44□□□□□ -0.1
CKS1B-202ENST00000368436 OCRLQ01968 901 aa14.44□□□□□ -0.1
CKS1B-202ENST00000368436 DECR1Q16698 335 aa14.44□□□□□ -0.1
CKS1B-202ENST00000368436 GLYR1Q49A26 553 aaPredicted RBP14.44□□□□□ -0.1
CKS1B-202ENST00000368436 SH2D4BQ5SQS7 431 aa14.44□□□□□ -0.1
CKS1B-202ENST00000368436 SHEQ5VZ18 495 aa14.44□□□□□ -0.1
CKS1B-202ENST00000368436 ZNF474Q6S9Z5 364 aaPredicted RBP14.44□□□□□ -0.1
CKS1B-202ENST00000368436 CCNYL1Q8N7R7 359 aa14.44□□□□□ -0.1
CKS1B-202ENST00000368436 CNEP1R1Q8N9A8 125 aa14.44□□□□□ -0.1
CKS1B-202ENST00000368436 DUSP19Q8WTR2 217 aa14.44□□□□□ -0.1
CKS1B-202ENST00000368436 PGM2Q96G03 612 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms