RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 VPS13CQ709C8 3753 aa9.43□□□□□ -0.9
PARP1-201ENST00000366790 A0A1W2PPM1 405 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 EEF1E1-BLOC1S5C9J1V9 151 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 LINC01387J3KSC0 135 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 UPK1AO00322 258 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 EEF1E1O43324 174 aaKnown RBP9.42□□□□□ -0.9
PARP1-201ENST00000366790 PLIN3O60664 434 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 TBX19O60806 448 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 NME6O75414 186 aaPredicted RBP9.42□□□□□ -0.9
PARP1-201ENST00000366790 JUNP05412 331 aaKnown RBP9.42□□□□□ -0.9
PARP1-201ENST00000366790 UROSP10746 265 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 PEPDP12955 493 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 DNASE1P24855 282 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 DPP4P27487 766 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 NTSP30990 170 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 EVI2BP34910 448 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 MC3RP41968 323 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 NCBP2P52298 156 aaKnown RBP eCLIP9.42□□□□□ -0.9
PARP1-201ENST00000366790 ZNF155Q12901 538 aaPredicted RBP9.42□□□□□ -0.9
PARP1-201ENST00000366790 FOXF2Q12947 444 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 KIAA0040Q15053 153 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 DECR1Q16698 335 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 IMPG1Q17R60 797 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 GLYR1Q49A26 553 aaPredicted RBP9.42□□□□□ -0.9
PARP1-201ENST00000366790 NOXRED1Q6NXP6 359 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 PAMR1Q6UXH9 720 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 CAMKMTQ7Z624 323 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 OR4K17Q8NGC6 315 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 OR4N2Q8NGD1 307 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 HOXB13Q92826 284 aaPredicted RBP9.42□□□□□ -0.9
PARP1-201ENST00000366790 EFHD2Q96C19 240 aaPredicted RBP9.42□□□□□ -0.9
PARP1-201ENST00000366790 ELP4Q96EB1 424 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 FCRL1Q96LA6 429 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 AMDHD1Q96NU7 426 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 DACH2Q96NX9 599 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 ALPK1Q96QP1 1244 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 RHOXF2Q9BQY4 288 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 LMF2Q9BU23 707 aaKnown RBP9.42□□□□□ -0.9
PARP1-201ENST00000366790 RBM24Q9BX46 236 aaKnown RBP9.42□□□□□ -0.9
PARP1-201ENST00000366790 LIME1Q9H400 295 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 GLIPR2Q9H4G4 154 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 SDHAF3Q9NRP4 125 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 CCM2LQ9NUG4 571 aaPredicted RBP9.42□□□□□ -0.9
PARP1-201ENST00000366790 OXSMQ9NWU1 459 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 FAM120CQ9NX05 1096 aaKnown RBP9.42□□□□□ -0.9
PARP1-201ENST00000366790 TBK1Q9UHD2 729 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 DKKL1Q9UK85 242 aa9.42□□□□□ -0.9
PARP1-201ENST00000366790 MRTO4Q9UKD2 239 aaKnown RBP9.42□□□□□ -0.9
PARP1-201ENST00000366790 NUP214P35658 2090 aaPredicted RBP9.41□□□□□ -0.9
PARP1-201ENST00000366790 ROS1P08922 2347 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 IGLV3-32A0A0A0MS00 114 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 A8MXE2 369 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 MSTNO14793 375 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 TNFSF13O75888 250 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 IL33O95760 270 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 MAP3K8P41279 467 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 STARP49675 285 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 AGFG1P52594 562 aaKnown RBP9.41□□□□□ -0.9
PARP1-201ENST00000366790 PSMD4P55036 377 aaKnown RBP9.41□□□□□ -0.9
PARP1-201ENST00000366790 DIO3P55073 304 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 EEFSECP57772 596 aaKnown RBP9.41□□□□□ -0.9
PARP1-201ENST00000366790 OCRLQ01968 901 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 SRYQ05066 204 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 SLC18A2Q05940 514 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 KRTAP21-3Q3LHN1 58 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 CFAP157Q5JU67 520 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 LIPMQ5VYY2 423 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 OR5M10Q6IEU7 315 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 OR2A2Q6IF42 318 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 TMEM107Q6UX40 140 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 TGIF2LYQ8IUE0 185 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 GRAMD2AQ8IUY3 354 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 OR2M3Q8NG83 312 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 SMPDL3BQ92485 455 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 TRMOQ9BU70 441 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 PLEKHF2Q9H8W4 249 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 C3orf14Q9HBI5 128 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 HHATLQ9HCP6 504 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 Q9N2J8 555 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 DDX18Q9NVP1 670 aaKnown RBP9.41□□□□□ -0.9
PARP1-201ENST00000366790 GALNT8Q9NY28 637 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 PPP4R1LQ9P1A2 415 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 MID2Q9UJV3 735 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 PACSIN3Q9UKS6 424 aa9.41□□□□□ -0.9
PARP1-201ENST00000366790 POLR3HQ9Y535 204 aaPredicted RBP9.41□□□□□ -0.9
PARP1-201ENST00000366790 A0A1W2PNV4 684 aa9.4□□□□□ -0.9
PARP1-201ENST00000366790 SLC28A1O00337 649 aa9.4□□□□□ -0.9
PARP1-201ENST00000366790 TNFRSF21O75509 655 aa9.4□□□□□ -0.9
PARP1-201ENST00000366790 CRCPO75575 148 aa9.4□□□□□ -0.9
PARP1-201ENST00000366790 TGM6O95932 706 aa9.4□□□□□ -0.9
PARP1-201ENST00000366790 RAF1P04049 648 aa9.4□□□□□ -0.9
PARP1-201ENST00000366790 HRGP04196 525 aa9.4□□□□□ -0.9
PARP1-201ENST00000366790 SHBGP04278 402 aa9.4□□□□□ -0.9
PARP1-201ENST00000366790 NEFHP12036 1026 aa9.4□□□□□ -0.9
PARP1-201ENST00000366790 CD99P14209 185 aa9.4□□□□□ -0.9
PARP1-201ENST00000366790 CPA3P15088 417 aa9.4□□□□□ -0.9
PARP1-201ENST00000366790 FRKP42685 505 aaPredicted RBP9.4□□□□□ -0.9
PARP1-201ENST00000366790 ZNHIT3Q15649 155 aaPredicted RBP9.4□□□□□ -0.9
PARP1-201ENST00000366790 Q6ZSR9 355 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms