RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 RPS6P62753 249 aaKnown RBP2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 CNTN2Q02246 1040 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 CYLC2Q14093 348 aaPredicted RBP2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 UBE2V2Q15819 145 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 TATDN3Q17R31 274 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 TMEM44Q2T9K0 475 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 USH1GQ495M9 461 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 MS4A13Q5J8X5 152 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 SEL1L3Q68CR1 1132 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 ZNF841Q6ZN19 808 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 CEACAM19Q7Z692 300 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 ANKRD37Q7Z713 158 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 SPEM1Q8N4L4 309 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 FBXO30Q8TB52 745 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 OSTF1Q92882 214 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 RAB3CQ96E17 227 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 C9orf85Q96MD7 179 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 PSMB7Q99436 277 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 VGLL1Q99990 258 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 SLC30A2Q9BRI3 323 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 TMEM117Q9H0C3 514 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 SLC25A51Q9H1U9 297 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 DHX33Q9H6R0 707 aaKnown RBP2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 GNB4Q9HAV0 340 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 RCOR3Q9P2K3 495 aaPredicted RBP2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 RNF24Q9Y225 148 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 MRPS7Q9Y2R9 242 aaKnown RBP2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 MOB4Q9Y3A3 225 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 MAB21L2Q9Y586 359 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 DDX49Q9Y6V7 483 aaKnown RBP2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 KDRP35968 1356 aa2.98□□□□□ -1.93
RNU6-28P-201ENST00000362378 ATP10DQ9P241 1426 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 A0A1B0GTH9 108 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 PPIAL4DF5H284 164 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 H0YCG3 227 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 PPIHO43447 177 aaKnown RBP2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 DUX1O43812 170 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 JCHAINP01591 159 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 HOXD4P09016 255 aaPredicted RBP2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 IQCF3P0C7M6 154 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 ZNF883P0CG24 379 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 ANXA3P12429 323 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 BCKDHAP12694 445 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 PRG2P13727 222 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 PVRP15151 417 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 XRCC1P18887 633 aaPredicted RBP2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 CA8P35219 290 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 PDK4Q16654 411 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 TPD52L1Q16890 204 aaPredicted RBP2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 CCDC57Q2TAC2 916 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 SPATA46Q5T0L3 261 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 DCST2Q5T1A1 773 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 ATAD3BQ5T9A4 648 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 PAQR6Q6TCH4 344 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 STAC2Q6ZMT1 411 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 GPRIN3Q6ZVF9 776 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 PRSS48Q7RTY5 328 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 TIPARPQ7Z3E1 657 aaKnown RBP2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 FGFRL1Q8N441 504 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 FAM133AQ8N9E0 248 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 OR4Q3Q8NH05 313 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 NANPQ8TBE9 248 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 SPRYD4Q8WW59 207 aaPredicted RBP2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 SLC5A11Q8WWX8 675 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 DHTKD1Q96HY7 919 aaPredicted RBP2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 AKR1E2Q96JD6 320 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 GSDMCQ9BYG8 508 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 GFRA4Q9GZZ7 299 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 ADNPQ9H2P0 1102 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 FAM120CQ9NX05 1096 aaKnown RBP2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 TBK1Q9UHD2 729 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 CYTH4Q9UIA0 394 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 KLK13Q9UKR3 277 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 SNX6Q9UNH7 406 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 DUSP12Q9UNI6 340 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 GMPPBQ9Y5P6 360 aa2.97□□□□□ -1.93
RNU6-28P-201ENST00000362378 GSAPA4D1B5 854 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 A8MUI8 341 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 SHISA9B4DS77 424 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 GPR89AB7ZAQ6 455 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 CASKO14936 926 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 MAGEB3O15480 346 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 GMFGO60234 142 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 PRAMEF12O95522 483 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 IGHV3-13P01766 116 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 IGFBP1P08833 259 aaPredicted RBP2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 GPR89BP0CG08 455 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 ATP6V1C1P21283 382 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 NT5EP21589 574 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 PAX7P23759 505 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 VEGFCP49767 419 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 NUCB2P80303 420 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 MS4A2Q01362 244 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 SELPLGQ14242 412 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 SNAI3Q3KNW1 292 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 NHLRC3Q5JS37 347 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 RABGAP1LQ5R372 815 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 LEMD1Q68G75 181 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 REG3GQ6UW15 175 aa2.96□□□□□ -1.94
RNU6-28P-201ENST00000362378 CCBE1Q6UXH8 406 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms