RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 NFYAP23511 347 aaPredicted RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 HTR1EP28566 365 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 RFC2P35250 354 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 P2RX1P51575 399 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 MAMDC2Q7Z304 686 aaPredicted RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 RAB8BQ92930 207 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 MICU1Q9BPX6 476 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 NLE1Q9NVX2 485 aaPredicted RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 FIGNL1Q6PIW4 674 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 OR4K15Q8NH41 348 aa8.85□□□□□ -0.99
VPS13A-203ENST00000360280 SETD7Q8WTS6 366 aaKnown RBP8.85□□□□□ -0.99
VPS13A-203ENST00000360280 BTBD17A6NE02 478 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 DRD2P14416 443 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 RAB3AP20336 220 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 LSAMPQ13449 338 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 UNC5DQ6UXZ4 953 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF783Q6ZMS7 281 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 USP51Q70EK9 711 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 SLC43A2Q8N370 569 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 PRTFDC1Q9NRG1 225 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 DLX5P56178 289 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 DESI1Q6ICB0 168 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 INTS5Q6P9B9 1019 aaKnown RBP8.84□□□□□ -0.99
VPS13A-203ENST00000360280 PLPP5Q8NEB5 264 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 OR5W2Q8NH69 310 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 ACOT11Q8WXI4 607 aaPredicted RBP8.84□□□□□ -0.99
VPS13A-203ENST00000360280 SGTBQ96EQ0 304 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 TTYH3Q9C0H2 523 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 OR6C2Q9NZP2 312 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 SHPRHQ149N8 1683 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 TMEM225BP0DP42 221 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 BCKDHBP21953 392 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 LACC1Q8IV20 430 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 ADAMTS18Q8TE60 1221 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 H0Y8G0 127 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 IMPA2O14732 288 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 HLA-DOBP13765 273 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 UBE2G2P60604 165 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 CARD17Q5XLA6 110 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 FAM111BQ6SJ93 734 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.84□□□□□ -0.99
VPS13A-203ENST00000360280 METTL2AQ96IZ6 378 aaKnown RBP8.84□□□□□ -0.99
VPS13A-203ENST00000360280 CFAP20Q9Y6A4 193 aaKnown RBP8.84□□□□□ -0.99
VPS13A-203ENST00000360280 ACTBL2Q562R1 376 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 AVPI1Q5T686 147 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF546Q86UE3 836 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 ALG8Q9BVK2 526 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 TAS2R16Q9NYV7 291 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF780AO75290 641 aaPredicted RBP8.84□□□□□ -0.99
VPS13A-203ENST00000360280 PTNP21246 168 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 SLC15A4Q8N697 577 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 OR5L2Q8NGL0 311 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 GTF2H4Q92759 462 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 FAM163AQ96GL9 167 aaPredicted RBP8.84□□□□□ -0.99
VPS13A-203ENST00000360280 CASD1Q96PB1 797 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 FBRSQ9HAH7 460 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 IL26Q9NPH9 171 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 TNFSF12O43508 249 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 CFIP05156 583 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 CBLP22681 906 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 TPGS2Q68CL5 300 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 NAA40Q86UY6 237 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 SORCS2Q96PQ0 1159 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 SLC2A1P11166 492 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 ADARB1P78563 741 aaKnown RBP8.84□□□□□ -0.99
VPS13A-203ENST00000360280 RBMS2Q15434 407 aaKnown RBP8.84□□□□□ -0.99
VPS13A-203ENST00000360280 TAF9Q16594 264 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 LHPPQ9H008 270 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 NPAP1Q9NZP6 1156 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 SBK2P0C263 348 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 GABRA3P34903 492 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 MRPS34P82930 218 aaKnown RBP8.84□□□□□ -0.99
VPS13A-203ENST00000360280 CCDC116Q8IYX3 515 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 C15orf54Q8N8G6 183 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 OR52P1PQ8NH57 321 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 SYNPRQ8TBG9 265 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 MMABQ96EY8 250 aaPredicted RBP8.84□□□□□ -0.99
VPS13A-203ENST00000360280 HOXD1Q9GZZ0 328 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 C1orf123Q9NWV4 160 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 SLIT2O94813 1529 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 SRPX2O60687 465 aaPredicted RBP8.84□□□□□ -0.99
VPS13A-203ENST00000360280 SERPINA5P05154 406 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 SLC35B2Q8TB61 432 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 STRADBQ9C0K7 418 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 SLC2A4RGQ9NR83 387 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 LAMA4Q16363 1823 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 KRBA1A5PL33 1030 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 FAM221BA6H8Z2 402 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 PPP1R2P9O14990 202 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 PMM2O15305 246 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 GALTP07902 379 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 FBLP22087 321 aaKnown RBP8.84□□□□□ -0.99
VPS13A-203ENST00000360280 MFGE8Q08431 387 aaPredicted RBP8.84□□□□□ -0.99
VPS13A-203ENST00000360280 UBXN2BQ14CS0 331 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 IRF4Q15306 451 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 BRICD5Q6PL45 260 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 OR52E2Q8NGJ4 325 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 OR10R2Q8NGX6 335 aa8.84□□□□□ -0.99
VPS13A-203ENST00000360280 PPP1R35Q8TAP8 253 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms