RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 SCO2O43819 266 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 PRKRAO75569 313 aaKnown RBP12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 NR2F6P10588 404 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 CD59P13987 128 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 CD36P16671 472 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 CD40LGP29965 261 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 KHKP50053 298 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 EPHA4P54764 986 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 COPZ1P61923 177 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 KEAP1Q14145 624 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 CSRP2Q16527 193 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 SNAP47Q5SQN1 464 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 RNF44Q7L0R7 432 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 ABHD13Q7L211 337 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 ZNF607Q96SK3 696 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 NUDT22Q9BRQ3 303 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 ZBTB20Q9HC78 741 aaPredicted RBP12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 NEK6Q9HC98 313 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 ACOT13Q9NPJ3 140 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 MS4A12Q9NXJ0 267 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 SCN3BQ9NY72 215 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 KIF17Q9P2E2 1029 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 LYVE1Q9Y5Y7 322 aa12.97□□□□□ -0.33
CSNK1E-201ENST00000359867 WASHC1A8K0Z3 465 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 AGRPO00253 132 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 RGS10O43665 173 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 DUX1O43812 170 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 ALX3O95076 343 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 MFN2O95140 757 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 CD1CP29017 333 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 GPR3P46089 330 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 ST13P50502 369 aaKnown RBP12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 GNA13Q14344 377 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 COLEC12Q5KU26 742 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 DBX2Q6ZNG2 339 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 CCDC71Q8IV32 467 aaPredicted RBP12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 ATG16L2Q8NAA4 619 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 IFI44Q8TCB0 444 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 ZNF566Q969W8 418 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 RERGQ96A58 199 aaPredicted RBP12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 LGALS12Q96DT0 336 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 ZNF681Q96N22 645 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 COQ7Q99807 217 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 OR51I1Q9H343 314 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 SERHL2Q9H4I8 314 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 DUSP21Q9H596 190 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 KRT84Q9NSB2 600 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 ENPP4Q9Y6X5 453 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 FLRT2O43155 660 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 EMC8O43402 210 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 FHP07954 510 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 CKMT1AP12532 417 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 RHCEP18577 417 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 PPP2R1BP30154 601 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 XCR1P46094 333 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 SERPINB10P48595 397 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 HMGA2P52926 109 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 PRR5P85299 388 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 TNFRSF17Q02223 184 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 TMPRSS9Q7Z410 1059 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 CCDC116Q8IYX3 515 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 ELMOD2Q8IZ81 293 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 OR4C15Q8NGM1 316 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 FBLIM1Q8WUP2 373 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 RAB8BQ92930 207 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 ZHX1-C8orf76Q96EF9 292 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 PIP5K1AQ99755 562 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 DSN1Q9H410 356 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 C3orf14Q9HBI5 128 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 NECTIN3Q9NQS3 549 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 KCMF1Q9P0J7 381 aa12.96□□□□□ -0.33
CSNK1E-201ENST00000359867 A0A1W2PQM1 296 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 PRAMEF25A6NGN4 478 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 SLC9B1P1A6NJY1 282 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 P2RX6O15547 441 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 HCRTR1O43613 425 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 B3GALT2O43825 422 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 IFNW1P05000 195 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 OR12D1P0DN82 309 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 ANXA8P13928 327 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 CPN2P22792 545 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 ACVR2AP27037 513 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 TLX1P31314 330 aaPredicted RBP12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 OR1E2P47887 323 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 CCL7P80098 99 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 MVKQ03426 396 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 MAD2L1BPQ15013 274 aaPredicted RBP12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 DEFB110Q30KQ9 67 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 LYPD8Q6UX82 237 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 GLRX5Q86SX6 157 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 AKAP14Q86UN6 197 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 PSD4Q8NDX1 1056 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 MCFD2Q8NI22 146 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 C10orf90Q96M02 699 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 SLIRPQ9GZT3 109 aaKnown RBP12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 IRF2BPLQ9H1B7 796 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 LYRM4Q9HD34 91 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 FAM60AQ9NP50 221 aa12.95□□□□□ -0.34
CSNK1E-201ENST00000359867 FBXO8Q9NRD0 319 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms