RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ACY1Q03154 408 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 SGPP2Q8IWX5 399 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 WDSUB1Q8N9V3 476 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 GCDHQ92947 438 aaPredicted RBP15.21■□□□□ 0.03
COL18A1-203ENST00000359759 SENP5Q96HI0 755 aaPredicted RBP15.21■□□□□ 0.03
COL18A1-203ENST00000359759 FAM86C1Q9NVL1 165 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 SCGB1D1O95968 90 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 PTTG1O95997 202 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 ARRB1P49407 418 aaPredicted RBP15.21■□□□□ 0.03
COL18A1-203ENST00000359759 UBE2NP61088 152 aaKnown RBP15.21■□□□□ 0.03
COL18A1-203ENST00000359759 ERVK-16P61578 105 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 COQ5Q5HYK3 327 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 OR51Q1Q8NH59 317 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 ECHDC3Q96DC8 303 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 C11orf49Q9H6J7 331 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 KRBA1A5PL33 1030 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 H3BMQ9 156 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 M0R3H8 397 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 FECHP22830 423 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 RPS21P63220 83 aaKnown RBP15.21■□□□□ 0.03
COL18A1-203ENST00000359759 AVL9Q8NBF6 648 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 IL17RDQ8NFM7 739 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 IGSF8Q969P0 613 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 COG8Q96MW5 612 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 NPY6RQ99463 290 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 NUBP2Q9Y5Y2 271 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 IGLON5A6NGN9 336 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 DNAJB5O75953 348 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 RAB3DO95716 219 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 S1PR4O95977 384 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 TGM4P49221 684 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 PRMT2P55345 433 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 ZNF767PQ75MW2 155 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 ANKK1Q8NFD2 765 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 DIO2Q92813 273 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 KIAA1143Q96AT1 154 aaPredicted RBP15.21■□□□□ 0.03
COL18A1-203ENST00000359759 VSX1Q9NZR4 365 aaPredicted RBP15.21■□□□□ 0.03
COL18A1-203ENST00000359759 CSNK1G3Q9Y6M4 447 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 FAM230AA0A1W2PPH8 454 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 F5H5K5 113 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 RNGTTO60942 597 aaKnown RBP15.21■□□□□ 0.02
COL18A1-203ENST00000359759 ATG12O94817 140 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 CERS1P27544 350 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 PGM2L1Q6PCE3 622 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 PRSS48Q7RTY5 328 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 PRR22Q8IZ63 422 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 HHIPL1Q96JK4 782 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 RBM24Q9BX46 236 aaKnown RBP15.21■□□□□ 0.02
COL18A1-203ENST00000359759 OR51E2Q9H255 320 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 FKRPQ9H9S5 495 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 LIPT1Q9Y234 373 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 PHYHO14832 338 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 BMP4P12644 408 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 OTX2P32243 289 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 PRSS3P35030 304 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 SFTPDP35247 375 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 RBM12BQ8IXT5 1001 aaKnown RBP15.21■□□□□ 0.02
COL18A1-203ENST00000359759 MINDY1Q8N5J2 469 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 SDR9C7Q8NEX9 313 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 KCNJ16Q9NPI9 418 aa15.21■□□□□ 0.02
COL18A1-203ENST00000359759 FGF18O76093 207 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 CD79AP11912 226 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 METTL11BQ5VVY1 283 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 OR52W1Q6IF63 320 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 CD163Q86VB7 1156 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 UEVLDQ8IX04 471 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 ABHD11Q8NFV4 315 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 OR2A12Q8NGT7 310 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 NT5C3BQ969T7 300 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 LOC102723532A0A0G2JNH3 316 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 LILRB3O75022 631 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 NCR1O76036 304 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 DEFB110Q30KQ9 67 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 SLX4IPQ5VYV7 408 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 APIPQ96GX9 242 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 STRADBQ9C0K7 418 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 RDH14Q9HBH5 336 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 MKS1Q9NXB0 559 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 TSTD3H0UI37 97 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 GAAP10253 952 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 M6PRP20645 277 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 MICAQ29983 383 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 RAB41Q5JT25 222 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 CNKSR3Q6P9H4 555 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 USP53Q70EK8 1073 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF419Q96HQ0 510 aaPredicted RBP15.2■□□□□ 0.02
COL18A1-203ENST00000359759 ZNF334Q9HCZ1 680 aaPredicted RBP15.2■□□□□ 0.02
COL18A1-203ENST00000359759 ACKR4Q9NPB9 350 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 B4GALT7Q9UBV7 327 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 OR1A2Q9Y585 309 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 H3BUI4 141 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 DCCP43146 1447 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 RPS15AP62244 130 aaKnown RBP15.2■□□□□ 0.02
COL18A1-203ENST00000359759 NKX3-2P78367 333 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 MYLIPQ8WY64 445 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 ATG4BQ9Y4P1 393 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 LOC105369274A0A096LPK9 316 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 FTCDNL1E5RQL4 147 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 SLC16A5O15375 505 aa15.2■□□□□ 0.02
COL18A1-203ENST00000359759 PIGRP01833 764 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms