RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 TRAPPC13A5PLN9 417 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 SPDEFO95238 335 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 THEGLP0DJG4 465 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 ALDH3B1P43353 468 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 MICAQ29983 383 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 SYT3Q9BQG1 590 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 HERPUD2Q9BSE4 406 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 ZNF160Q9HCG1 818 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 UBFD1O14562 309 aaKnown RBP17.41■□□□□ 0.38
SHANK1-202ENST00000359082 TSPAN15O95858 294 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 ERVPABLB-1P60509 514 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 RUNX3Q13761 415 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 GK2Q14410 553 aaPredicted RBP17.41■□□□□ 0.38
SHANK1-202ENST00000359082 ZNF674Q2M3X9 581 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 PNCKQ6P2M8 343 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 FAM198BQ6UWH4 519 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 ZNF619Q8N2I2 560 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 FNDC8Q8TC99 324 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 SLC2A11Q9BYW1 496 aa17.41■□□□□ 0.38
SHANK1-202ENST00000359082 M0R3H8 397 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 CASC3O15234 703 aaKnown RBP17.4■□□□□ 0.38
SHANK1-202ENST00000359082 FAM189BP81408 668 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 BORAQ6PGQ7 559 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 GTPBP8Q8N3Z3 284 aaPredicted RBP17.4■□□□□ 0.38
SHANK1-202ENST00000359082 OR1S1Q8NH92 325 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 PEAK1Q9H792 1746 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 BMXP51813 675 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 ERVK-16P61578 105 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 NAGSQ8N159 534 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 SLC17A9Q9BYT1 436 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 F5H5K5 113 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 DNAJB5O75953 348 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 SEMA4FO95754 770 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 FBXO45P0C2W1 286 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 PROZP22891 400 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 CAV2P51636 162 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 RGNQ15493 299 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 PRAMEF8Q5VWM4 474 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 PRAMEF7Q5VXH5 474 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 ELP2Q6IA86 826 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 UNC5DQ6UXZ4 953 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 C3P1Q6ZMU1 363 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 COMMD6Q7Z4G1 85 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 KCTD20Q7Z5Y7 419 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 SERINC5Q86VE9 423 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 SYT14Q8NB59 555 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 OR9K2Q8NGE7 335 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 NPIPA5A0A0B4J1W7 369 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 NPIPA7E9PJI5 369 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 NPIPA8P0DM63 369 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 RABIFP47224 123 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 ACTBP60709 375 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 ACTG1P63261 375 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 GPR149Q86SP6 731 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 CACNG6Q9BXT2 260 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 HOXD1Q9GZZ0 328 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 NXF5Q9H1B4 397 aaKnown RBP17.4■□□□□ 0.38
SHANK1-202ENST00000359082 IGSF5Q9NSI5 407 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 MAGED1Q9Y5V3 778 aaPredicted RBP17.4■□□□□ 0.38
SHANK1-202ENST00000359082 MAN2B1O00754 1011 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 C7P10643 843 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 DYRK1AQ13627 763 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 CHST14Q8NCH0 376 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 ZMYND19Q96E35 227 aaPredicted RBP17.4■□□□□ 0.38
SHANK1-202ENST00000359082 ALG8Q9BVK2 526 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 SLC25A18Q9H1K4 315 aa17.4■□□□□ 0.38
SHANK1-202ENST00000359082 LTBP3Q9NS15 1303 aa17.39■□□□□ 0.38
SHANK1-202ENST00000359082 A0A1W2PQL4 384 aaPredicted RBP17.39■□□□□ 0.37
SHANK1-202ENST00000359082 TGM5O43548 720 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 SSX4O60224 188 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 IFNA10P01566 189 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 CAPNS1P04632 268 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 GABRR1P24046 479 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 BATFQ16520 125 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 RAB6CQ53S08 254 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 OR14K1Q8NGZ2 314 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 C7orf43Q8WVR3 580 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 RAB6CQ9H0N0 254 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 PELI2Q9HAT8 420 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 SGK494L7N484 410 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 SYPP08247 313 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 OSMP13725 252 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 NTSR1P30989 418 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 ANKK1Q8NFD2 765 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 OR5AR1Q8NGP9 310 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 SACM1LQ9NTJ5 587 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 F5H5P2 479 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 LILRB5O75023 590 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 HLCSP50747 726 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 LPAL2Q16609 132 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 CNTNAP3BQ96NU0 1288 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 C16orf70Q9BSU1 422 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 XYLT2Q9H1B5 865 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 FOLH1BQ9HBA9 442 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 RHBDD3Q9Y3P4 386 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 FAM230AA0A1W2PPH8 454 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 NUDT21O43809 227 aaKnown RBP17.39■□□□□ 0.37
SHANK1-202ENST00000359082 JRKO75564 520 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 SERPINA5P05154 406 aa17.39■□□□□ 0.37
SHANK1-202ENST00000359082 UGT2B7P16662 529 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms