RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 VSTM2LQ96N03 204 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 ING2Q9H160 280 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 CACYBPQ9HB71 228 aaKnown RBP11.12□□□□□ -0.63
SYN3-202ENST00000358763 SLC22A11Q9NSA0 550 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 KCNE5Q9UJ90 142 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 RARRES3Q9UL19 164 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 MKL2Q9ULH7 1088 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 SRPK3Q9UPE1 567 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 SATB2Q9UPW6 733 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 NTNG1Q9Y2I2 539 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 PCDHGA8Q9Y5G5 932 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 H3BNH8 94 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 UGT2B17O75795 530 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 KCNK2O95069 426 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 IFI6P09912 130 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 ELAVL4P26378 380 aaKnown RBP11.12□□□□□ -0.63
SYN3-202ENST00000358763 DUSP3P51452 185 aaPredicted RBP11.12□□□□□ -0.63
SYN3-202ENST00000358763 RAPSNQ13702 412 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 RHBDD2Q6NTF9 364 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 COX15Q7KZN9 410 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 AQP11Q8NBQ7 271 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 PTPMT1Q8WUK0 201 aaPredicted RBP11.12□□□□□ -0.63
SYN3-202ENST00000358763 ARSGQ96EG1 525 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 ITPAQ9BY32 194 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 OR8D2Q9GZM6 311 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 SIDT1Q9NXL6 827 aaKnown RBP11.12□□□□□ -0.63
SYN3-202ENST00000358763 MMACHCQ9Y4U1 282 aa11.12□□□□□ -0.63
SYN3-202ENST00000358763 IGKV3D-11A0A0A0MRZ8 115 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 AGAP5A6NIR3 686 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 CPSF4LA6NMK7 179 aaKnown RBP11.11□□□□□ -0.63
SYN3-202ENST00000358763 PRKAR1BP31321 381 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 GRK6P43250 576 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 CLK3P49761 638 aaKnown RBP11.11□□□□□ -0.63
SYN3-202ENST00000358763 HMGA2P52926 109 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 RGS8P57771 180 aaPredicted RBP11.11□□□□□ -0.63
SYN3-202ENST00000358763 RHAGQ02094 409 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 CCDC157Q569K6 752 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 QSOX2Q6ZRP7 698 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 BMP8AQ7Z5Y6 402 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 AMER2Q8N7J2 671 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 ZNF614Q8N883 585 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 ARHGDIGQ99819 225 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 LMF2Q9BU23 707 aaKnown RBP11.11□□□□□ -0.63
SYN3-202ENST00000358763 VN1R1Q9GZP7 353 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 TRIM45Q9H8W5 580 aaPredicted RBP11.11□□□□□ -0.63
SYN3-202ENST00000358763 AASSQ9UDR5 926 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 SYT5O00445 386 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 KIAA0513O60268 411 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 IGKV1D-16P01601 117 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 CLPSP04118 112 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 ITGAMP11215 1152 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 FUT7Q11130 342 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 LARS2Q15031 903 aaKnown RBP11.11□□□□□ -0.63
SYN3-202ENST00000358763 NSDHLQ15738 373 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 YOD1Q5VVQ6 348 aaPredicted RBP11.11□□□□□ -0.63
SYN3-202ENST00000358763 DHRS4L2Q6PKH6 230 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 THAP5Q7Z6K1 395 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 RHBDD1Q8TEB9 315 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 SENP5Q96HI0 755 aaPredicted RBP11.11□□□□□ -0.63
SYN3-202ENST00000358763 FNDC11Q9BVV2 318 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 PAPOLBQ9NRJ5 636 aaKnown RBP11.11□□□□□ -0.63
SYN3-202ENST00000358763 ACAD8Q9UKU7 415 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 TMCC3Q9ULS5 477 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 NUP210LQ5VU65 1888 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 BRINP1O60477 761 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 NTN1O95631 604 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 LDOC1O95751 146 aaPredicted RBP11.11□□□□□ -0.63
SYN3-202ENST00000358763 CDH2P19022 906 aaPredicted RBP11.11□□□□□ -0.63
SYN3-202ENST00000358763 LSM11P83369 360 aaKnown RBP eCLIP11.11□□□□□ -0.63
SYN3-202ENST00000358763 SF3A2Q15428 464 aaKnown RBP11.11□□□□□ -0.63
SYN3-202ENST00000358763 MEP1AQ16819 746 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 CTU2Q2VPK5 515 aaKnown RBP11.11□□□□□ -0.63
SYN3-202ENST00000358763 FLYWCH1Q4VC44 716 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 DCST1Q5T197 706 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 LANCL3Q6ZV70 420 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 ZNF615Q8N8J6 731 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 SLC7A13Q8TCU3 470 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 HOXB13Q92826 284 aaPredicted RBP11.11□□□□□ -0.63
SYN3-202ENST00000358763 PRRC1Q96M27 445 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 PELOQ9BRX2 385 aaKnown RBP11.11□□□□□ -0.63
SYN3-202ENST00000358763 GRIP2Q9C0E4 1043 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 KLHL28Q9NXS3 571 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 ZNF232Q9UNY5 417 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 IFT52Q9Y366 437 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 HCN4Q9Y3Q4 1203 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 CLCA3PQ9Y6N3 262 aa11.11□□□□□ -0.63
SYN3-202ENST00000358763 RALGAPA1Q6GYQ0 2036 aa11.1□□□□□ -0.63
SYN3-202ENST00000358763 A6NHS1 94 aa11.1□□□□□ -0.63
SYN3-202ENST00000358763 EFCAB7A8K855 629 aa11.1□□□□□ -0.63
SYN3-202ENST00000358763 SLC16A6O15403 523 aa11.1□□□□□ -0.63
SYN3-202ENST00000358763 BCAS1O75363 584 aaPredicted RBP11.1□□□□□ -0.63
SYN3-202ENST00000358763 GASTP01350 101 aa11.1□□□□□ -0.63
SYN3-202ENST00000358763 ANXA8P13928 327 aa11.1□□□□□ -0.63
SYN3-202ENST00000358763 TRHRP34981 398 aaPredicted RBP11.1□□□□□ -0.63
SYN3-202ENST00000358763 TAS2R41P59536 307 aa11.1□□□□□ -0.63
SYN3-202ENST00000358763 IL5RAQ01344 420 aa11.1□□□□□ -0.63
SYN3-202ENST00000358763 CD47Q08722 323 aa11.1□□□□□ -0.63
SYN3-202ENST00000358763 NPRL3Q12980 569 aa11.1□□□□□ -0.63
SYN3-202ENST00000358763 MRPL2Q5T653 305 aaKnown RBP11.1□□□□□ -0.63
SYN3-202ENST00000358763 ZNF691Q5VV52 312 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms