RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 HRNRQ86YZ3 2850 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-204ENST00000356316 KIAA1549Q9HCM3 1950 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 A0A087WV62 115 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 MYO1GB0I1T2 1018 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 LINC01387J3KSC0 135 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 SCO2O43819 266 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 GLRA3O75311 464 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 NME6O75414 186 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-204ENST00000356316 SMNDC1O75940 238 aaKnown RBP eCLIP9.66□□□□□ -0.86
CAPN3-204ENST00000356316 PEPDP12955 493 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 ZNF708P17019 499 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 HK1P19367 917 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 NTSP30990 170 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 EVI2BP34910 448 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 HTR6P50406 440 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 LHX2P50458 406 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 CCDC153Q494R4 210 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 TMEM107Q6UX40 140 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 UBQLNLQ8IYU4 475 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 GCNT2Q8N0V5 402 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 CCDC63Q8NA47 563 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 OR7G2Q8NG99 324 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 OR4N2Q8NGD1 307 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 FAM76AQ8TAV0 307 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 MBD6Q96DN6 1003 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 ALPK1Q96QP1 1244 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 DSN1Q9H410 356 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 GSTO2Q9H4Y5 243 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 Q9N2J8 555 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 DDX18Q9NVP1 670 aaKnown RBP9.66□□□□□ -0.86
CAPN3-204ENST00000356316 GALNT8Q9NY28 637 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 STOML1Q9UBI4 398 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 PACSIN3Q9UKS6 424 aa9.66□□□□□ -0.86
CAPN3-204ENST00000356316 NIPBLQ6KC79 2804 aaeCLIP9.66□□□□□ -0.86
CAPN3-204ENST00000356316 SETD2Q9BYW2 2564 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-204ENST00000356316 MPDZO75970 2070 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 UQCRHLA0A096LP55 91 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 SH3D21A4FU49 640 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 SLC22A20A6NK97 555 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 A8MXE2 369 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 ZIC3O60481 467 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 SEC22BO75396 215 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 KCNH1O95259 989 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 CRHP06850 196 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 GPC1P35052 558 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 CPOXP36551 454 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 MC3RP41968 323 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 RFX3P48380 749 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 CLDN18P56856 261 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 PSG6Q00889 435 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 GANABQ14697 944 aaKnown RBP9.65□□□□□ -0.86
CAPN3-204ENST00000356316 RAET1LQ5VY80 246 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 FAM219BQ5XKK7 198 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 NOXRED1Q6NXP6 359 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 PAMR1Q6UXH9 720 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 NPSR1Q6W5P4 371 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 ZYG11AQ6WRX3 759 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 TRIM46Q7Z4K8 759 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 CNEP1R1Q8N9A8 125 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 DUSP19Q8WTR2 217 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 RHOXF2Q9BQY4 288 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 SLC39A3Q9BRY0 314 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 TBL1XR1Q9BZK7 514 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 HHATLQ9HCP6 504 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 NEUROD4Q9HD90 331 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 MYNNQ9NPC7 610 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 TAS2R7Q9NYW3 318 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 ABCG2Q9UNQ0 655 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 C19orf53Q9UNZ5 99 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-204ENST00000356316 POLR3HQ9Y535 204 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-204ENST00000356316 NF1P21359 2839 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 SPG11Q96JI7 2443 aa9.65□□□□□ -0.86
CAPN3-204ENST00000356316 A0A1W2PPM1 405 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 TTC36A6NLP5 189 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 SLC28A1O00337 649 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 UBFD1O14562 309 aaKnown RBP9.64□□□□□ -0.87
CAPN3-204ENST00000356316 MSTNO14793 375 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 RGS14O43566 566 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 FADS1O60427 444 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 RSL1D1O76021 490 aaKnown RBP9.64□□□□□ -0.87
CAPN3-204ENST00000356316 IL33O95760 270 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 TGM6O95932 706 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 UROSP10746 265 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 CPA3P15088 417 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 FOSL1P15407 271 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 GABRA3P34903 492 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 KCNJ5P48544 419 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 GAS1P54826 345 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 FOXA1P55317 472 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 RPS3AP61247 264 aaKnown RBP9.64□□□□□ -0.87
CAPN3-204ENST00000356316 C17orf67Q0P5P2 114 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 STX5Q13190 355 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 FGFBP1Q14512 234 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 POU4F3Q15319 338 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 SGCBQ16585 318 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 DEFB113Q30KQ7 82 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 VPS26BQ4G0F5 336 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 FAM71E1Q6IPT2 247 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 PLXDC2Q6UX71 529 aa9.64□□□□□ -0.87
CAPN3-204ENST00000356316 IKBIPQ70UQ0 350 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms