RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 EVA1AQ9H8M9 152 aa12.13□□□□□ -0.47
RNF220-202ENST00000355387 YARS2Q9Y2Z4 477 aaKnown RBP12.13□□□□□ -0.47
RNF220-202ENST00000355387 MRPS23Q9Y3D9 190 aaKnown RBP12.13□□□□□ -0.47
RNF220-202ENST00000355387 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 GABRPO00591 440 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 PCCBP05166 539 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 COL4A2P08572 1712 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 CCNYL3P0C7X3 344 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 SHC2P98077 582 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 TNK1Q13470 666 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 SZRD1Q7Z422 152 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 NUP43Q8NFH3 380 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 ZFAND1Q8TCF1 268 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 ZNF707Q96C28 371 aaPredicted RBP12.12□□□□□ -0.47
RNF220-202ENST00000355387 GIMAP5Q96F15 307 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 TM9SF2Q99805 663 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 TMEM246Q9BRR3 403 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 MRPS30Q9NP92 439 aaKnown RBP12.12□□□□□ -0.47
RNF220-202ENST00000355387 MAU2Q9Y6X3 613 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 IFI6P09912 130 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 ERVK-21P61565 698 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 C19orf57Q0VDD7 668 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 EOGTQ5NDL2 527 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 ZNF322Q6U7Q0 402 aaPredicted RBP12.12□□□□□ -0.47
RNF220-202ENST00000355387 RSPRY1Q96DX4 576 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 PRSS16Q9NQE7 514 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 ACOXLQ9NUZ1 547 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 OBP2AQ9NY56 170 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 THAP10Q9P2Z0 257 aaPredicted RBP12.12□□□□□ -0.47
RNF220-202ENST00000355387 CHST2Q9Y4C5 530 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 ATG4BQ9Y4P1 393 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 ERI3O43414 337 aaKnown RBP12.12□□□□□ -0.47
RNF220-202ENST00000355387 C1QBP02746 253 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 THBS1P07996 1170 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 STXBP1P61764 594 aaKnown RBP12.12□□□□□ -0.47
RNF220-202ENST00000355387 BTG1P62324 171 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 EIPR1Q53HC9 387 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 FAM209AQ5JX71 171 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 TYW3Q6IPR3 259 aaKnown RBP12.12□□□□□ -0.47
RNF220-202ENST00000355387 RPL13AP3Q6NVV1 102 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 ADCK2Q7Z695 626 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 NRROSQ86YC3 692 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 SYT14Q8NB59 555 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 OR2T33Q8NG76 320 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 NEIL3Q8TAT5 605 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 SPPL3Q8TCT6 385 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 FAM46AQ96IP4 442 aaKnown RBP12.12□□□□□ -0.47
RNF220-202ENST00000355387 C12orf66Q96MD2 445 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 LGR4Q9BXB1 951 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 KLHL31Q9H511 634 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 WDR26Q9H7D7 661 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 SLC6A20Q9NP91 592 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 IL23AQ9NPF7 189 aa12.12□□□□□ -0.47
RNF220-202ENST00000355387 TBC1D3KA0A087X1G2 549 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 TBC1D3BA6NDS4 549 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 TBC1D3FA6NER0 549 aaPredicted RBP12.11□□□□□ -0.47
RNF220-202ENST00000355387 TFECO14948 347 aaPredicted RBP12.11□□□□□ -0.47
RNF220-202ENST00000355387 PGRMC2O15173 223 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 LYRM1O43325 122 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 NDUFV2P19404 249 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 ITGB8P26012 769 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 LSM11P83369 360 aaKnown RBP eCLIP12.11□□□□□ -0.473e-7■■□□□ 12.9
RNF220-202ENST00000355387 TBC1D3GQ6DHY5 549 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 VASNQ6EMK4 673 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 SDE2Q6IQ49 451 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 ZNF425Q6IV72 752 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 CDC73Q6P1J9 531 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 TMEM107Q6UX40 140 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 ZNF438Q7Z4V0 828 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 ADGRD2Q7Z7M1 963 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 RNF113BQ8IZP6 322 aaKnown RBP12.11□□□□□ -0.47
RNF220-202ENST00000355387 TTC9Q92623 222 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 CREB3L1Q96BA8 519 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 MS4A4EQ96PG1 132 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 GTPBP2Q9BX10 602 aaKnown RBP12.11□□□□□ -0.47
RNF220-202ENST00000355387 MTHFD2LQ9H903 347 aaPredicted RBP12.11□□□□□ -0.47
RNF220-202ENST00000355387 RANGRFQ9HD47 186 aaPredicted RBP12.11□□□□□ -0.47
RNF220-202ENST00000355387 PHPT1Q9NRX4 125 aaPredicted RBP12.11□□□□□ -0.47
RNF220-202ENST00000355387 TM7SF3Q9NS93 570 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 TOR4AQ9NXH8 423 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 NUFIP1Q9UHK0 495 aaKnown RBP12.11□□□□□ -0.47
RNF220-202ENST00000355387 RWDD3Q9Y3V2 267 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 C4orf51C9J302 202 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 ERAL1O75616 437 aaKnown RBP12.11□□□□□ -0.47
RNF220-202ENST00000355387 RGS9O75916 674 aaPredicted RBP12.11□□□□□ -0.47
RNF220-202ENST00000355387 LALBAP00709 142 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 GNSP15586 552 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 EPCAMP16422 314 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 PRKCAP17252 672 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 MESP2Q0VG99 397 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 ADAM15Q13444 863 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 PDGFRLQ15198 375 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 FAM214AQ32MH5 1076 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 C6orf132Q5T0Z8 1188 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 GDF7Q7Z4P5 450 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 MARCH9Q86YJ5 346 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 CCDC116Q8IYX3 515 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 HDDC3Q8N4P3 179 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 CAMKK1Q8N5S9 505 aa12.11□□□□□ -0.47
RNF220-202ENST00000355387 TMEM145Q8NBT3 493 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms