RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 RANGRFQ9HD47 186 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-204ENST00000353317 EVA1BQ9NVM1 165 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 GPR179Q6PRD1 2367 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 A0A0B4J293 547 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 A0A1W2PQL4 384 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-204ENST00000353317 HMX3A6NHT5 357 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 WASHC1A8K0Z3 465 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 CENPBD1B2RD01 187 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 PLPP1O14494 284 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 HCRTR1O43613 425 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 CSF2P04141 144 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 CSF3P09919 207 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 CLEC2LP0C7M8 214 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 BCL6P41182 706 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 XKP51811 444 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 MAZP56270 477 aaKnown RBP8.06□□□□□ -1.12
TRIM55-204ENST00000353317 REEP5Q00765 189 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 BNC1Q01954 994 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 SCN1BQ07699 218 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 MLLT11Q13015 90 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-204ENST00000353317 MADCAM1Q13477 382 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 DCST1Q5T197 706 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 MFSD4BQ5TF39 518 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 FAM131AQ6UXB0 335 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 CASP12Q6UXS9 341 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 PRR23CQ6ZRP0 262 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 UBE2J2Q8N2K1 259 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 IQCF1Q8N6M8 205 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 FAM181AQ8N9Y4 354 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 OR4D11Q8NGI4 311 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 OR8J1Q8NGP2 316 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 RNF31Q96EP0 1072 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 RNF170Q96K19 258 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 BEX2Q9BXY8 128 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 SLAMF7Q9NQ25 335 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 TXNL4BQ9NX01 149 aaKnown RBP8.06□□□□□ -1.12
TRIM55-204ENST00000353317 CPNE7Q9UBL6 633 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 PLEKHB1Q9UF11 243 aaPredicted RBP8.06□□□□□ -1.12
TRIM55-204ENST00000353317 APOBEC3BQ9UH17 382 aaKnown RBP8.06□□□□□ -1.12
TRIM55-204ENST00000353317 NUFIP1Q9UHK0 495 aaKnown RBP8.06□□□□□ -1.12
TRIM55-204ENST00000353317 TMCC3Q9ULS5 477 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 SSR3Q9UNL2 185 aa8.06□□□□□ -1.12
TRIM55-204ENST00000353317 RPL36Q9Y3U8 105 aaKnown RBP8.06□□□□□ -1.12
TRIM55-204ENST00000353317 SEC16AO15027 2179 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 SMIM30A4D0T7 59 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 ISM1B1AKI9 464 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 LRRTM2O43300 516 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 OR1F1O43749 312 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 TLX2O43763 284 aaPredicted RBP8.05□□□□□ -1.12
TRIM55-204ENST00000353317 TP53P04637 393 aaPredicted RBP8.05□□□□□ -1.12
TRIM55-204ENST00000353317 PVRP15151 417 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 POLR2CP19387 275 aaPredicted RBP8.05□□□□□ -1.12
TRIM55-204ENST00000353317 UQCRC2P22695 453 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 RPL3P39023 403 aaKnown RBP8.05□□□□□ -1.12
TRIM55-204ENST00000353317 RPS5P46782 204 aaKnown RBP8.05□□□□□ -1.12
TRIM55-204ENST00000353317 HNRNPA0Q13151 305 aaKnown RBP8.05□□□□□ -1.12
TRIM55-204ENST00000353317 ASAH1Q13510 395 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 Q5BKY6 102 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 C22orf42Q6IC83 251 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 PGBD2Q6P3X8 592 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 SLC7A13Q8TCU3 470 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 C17orf50Q8WW18 174 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 SLC7A6Q92536 515 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 TMEM19Q96HH6 336 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 NLNQ9BYT8 704 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 SLC22A4Q9H015 551 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 C11orf54Q9H0W9 315 aaPredicted RBP8.05□□□□□ -1.12
TRIM55-204ENST00000353317 ABCG4Q9H172 646 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 POLR2J3Q9H1A7 115 aaKnown RBP8.05□□□□□ -1.12
TRIM55-204ENST00000353317 RHBGQ9H310 441 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 MIEF1Q9NQG6 463 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 FSCN3Q9NQT6 498 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 YARS2Q9Y2Z4 477 aaKnown RBP8.05□□□□□ -1.12
TRIM55-204ENST00000353317 COLEC10Q9Y6Z7 277 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 OR6C74A6NCV1 312 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 FABP12A6NFH5 140 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 B4DGG1 531 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 B4DXG7 233 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 MYL12BO14950 172 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 PRKYO43930 277 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 CTSVO60911 334 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 CTSBP07858 339 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 MYF5P13349 255 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 NME1P15531 152 aaKnown RBP8.05□□□□□ -1.12
TRIM55-204ENST00000353317 TNNI3P19429 210 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 SSTR4P31391 388 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 HSD17B2P37059 387 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 CCR8P51685 355 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 LSM11P83369 360 aaKnown RBP eCLIP8.05□□□□□ -1.12
TRIM55-204ENST00000353317 TARDBPQ13148 414 aaKnown RBP eCLIP8.05□□□□□ -1.12
TRIM55-204ENST00000353317 C1DQ13901 141 aaKnown RBP8.05□□□□□ -1.12
TRIM55-204ENST00000353317 HEPACAMQ14CZ8 416 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 ZNF425Q6IV72 752 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 FBXO42Q6P3S6 717 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 DEF8Q6ZN54 512 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 ADCK2Q7Z695 626 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 OR9Q1Q8NGQ5 310 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 DNASE2BQ8WZ79 361 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 RAB8BQ92930 207 aa8.05□□□□□ -1.12
TRIM55-204ENST00000353317 MTERF3Q96E29 417 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms