RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 RP1P56715 2156 aa13.02□□□□□ -0.33
TRIM4-201ENST00000349062 ANKRD34BA5PLL1 514 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 AP3D1O14617 1153 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 EMC8O43402 210 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 IL18R1Q13478 541 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 SLC30A6Q6NXT4 461 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 USP53Q70EK8 1073 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 USP43Q70EL4 1123 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 TDHQ8IZJ6 230 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 LRRC25Q8N386 305 aaPredicted RBP13.01□□□□□ -0.33
TRIM4-201ENST00000349062 DNAJC22Q8N4W6 341 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 OR52P1PQ8NH57 321 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 TP53INP1Q96A56 240 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 KLHDC7BQ96G42 594 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 ZFYVE21Q9BQ24 234 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 GABARAPL1Q9H0R8 117 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 DUSP21Q9H596 190 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 POLMQ9NP87 494 aaPredicted RBP13.01□□□□□ -0.33
TRIM4-201ENST00000349062 FGF17O60258 216 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 MMP11P24347 488 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 IFITM2Q01629 132 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 PRAMEF17Q5VTA0 474 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 BHLHB9Q6PI77 547 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 NKAIN4Q8IVV8 208 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 MYDGFQ969H8 173 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 VMP1Q96GC9 406 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 TGM7Q96PF1 710 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 PSD2Q9BQI7 771 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 TTTY10Q9BZA0 68 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 SLIRPQ9GZT3 109 aaKnown RBP13.01□□□□□ -0.33
TRIM4-201ENST00000349062 NECTIN3Q9NQS3 549 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 ACSS1Q9NUB1 689 aaPredicted RBP13.01□□□□□ -0.33
TRIM4-201ENST00000349062 KCMF1Q9P0J7 381 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 CELSR3Q9NYQ7 3312 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 FAM170BA6NMN3 283 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 CLCA1A8K7I4 914 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 CCRL2O00421 344 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 PEX12O00623 359 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 PIP5K1CO60331 668 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 MED26O95402 600 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 IFNA16P05015 189 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 CPMP14384 443 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 AHRP35869 848 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 RPS15AP62244 130 aaKnown RBP13.01□□□□□ -0.33
TRIM4-201ENST00000349062 DUSP5Q16690 384 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 SPANXN2Q5MJ10 180 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 FCRL6Q6DN72 434 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 HSDL2Q6YN16 418 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 ZER1Q7Z7L7 766 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 DEPDC4Q8N2C3 294 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 GATSQ8NAP1 163 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 TBX5Q99593 518 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 HOXD1Q9GZZ0 328 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 A4GALTQ9NPC4 353 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 MTCH2Q9Y6C9 303 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 CACNA1EQ15878 2313 aa13.01□□□□□ -0.33
TRIM4-201ENST00000349062 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 FAM183AA6NL82 134 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 PRICKLE3O43900 615 aaPredicted RBP13□□□□□ -0.33
TRIM4-201ENST00000349062 IGHV4-34P06331 123 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 ADRA2AP08913 450 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 PRG2P13727 222 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 GABRA3P34903 492 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 ZNF425Q6IV72 752 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 TMEM184AQ6ZMB5 413 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 COX18Q8N8Q8 333 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 ZDHHC1Q8WTX9 485 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 SLC22A18Q96BI1 424 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 OR2A5Q96R48 311 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 MCHR1Q99705 422 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 GDF15Q99988 308 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 PLA2G12AQ9BZM1 189 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 ZNF221Q9UK13 617 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 MMP17Q9ULZ9 603 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 SLC35F4A4IF30 521 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 LOC110117498-PIK3R3F6TDL0 507 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 DYRK3O43781 588 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 GRK5P34947 590 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 TRHRP34981 398 aaPredicted RBP13□□□□□ -0.33
TRIM4-201ENST00000349062 FOXL2P58012 376 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 OR2B6P58173 313 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 GABARAPL2P60520 117 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 ZNF155Q12901 538 aaPredicted RBP13□□□□□ -0.33
TRIM4-201ENST00000349062 KCNAB1Q14722 419 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 ACSM5Q6NUN0 579 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 PGBD2Q6P3X8 592 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 SREK1IP1Q8N9Q2 155 aaPredicted RBP13□□□□□ -0.33
TRIM4-201ENST00000349062 MINDY2Q8NBR6 621 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 THSD1Q9NS62 852 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 CBLP22681 906 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 CASP3P42574 277 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 MAN2A2P49641 1150 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 DEFA1P59665 94 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 DEFA3P59666 94 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 TYW3Q6IPR3 259 aaKnown RBP13□□□□□ -0.33
TRIM4-201ENST00000349062 NRMQ8IXM6 262 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 MAP3K3Q99759 626 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 SEMA4GQ9NTN9 838 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 A4GNTQ9UNA3 340 aa13□□□□□ -0.33
TRIM4-201ENST00000349062 DMDP11532 3685 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms