RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 SLC25A30Q5SVS4 291 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 TMEM215Q68D42 235 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 ERMAPQ96PL5 475 aaPredicted RBP17.52■□□□□ 0.4
SCARF1-202ENST00000348987 TEFMQ96QE5 360 aaKnown RBP17.52■□□□□ 0.4
SCARF1-202ENST00000348987 CPEB1Q9BZB8 566 aaKnown RBP17.52■□□□□ 0.4
SCARF1-202ENST00000348987 METTL17Q9H7H0 456 aaPredicted RBP17.52■□□□□ 0.4
SCARF1-202ENST00000348987 HCFC1R1Q9NWW0 138 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 TEX46H3BTG2 121 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 CASC3O15234 703 aaKnown RBP17.52■□□□□ 0.4
SCARF1-202ENST00000348987 PRODHO43272 600 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 GNRH1P01148 92 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 CTSAP10619 480 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 CSF2RAP15509 400 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 SLC1A3P43003 542 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 SELENOPP49908 381 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 ZP1P60852 638 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 DUSP6Q16828 381 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 ZSWIM7Q19AV6 140 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 IER5LQ5T953 404 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 TNFAIP8L2Q6P589 184 aaPredicted RBP17.52■□□□□ 0.4
SCARF1-202ENST00000348987 LRFN4Q6PJG9 635 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 GDPD4Q6W3E5 623 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 ZER1Q7Z7L7 766 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 LRRC28Q86X40 367 aaPredicted RBP17.52■□□□□ 0.4
SCARF1-202ENST00000348987 OR4F15Q8NGB8 312 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 PTP4A1Q93096 173 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 CACNG6Q9BXT2 260 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 PLA2G12AQ9BZM1 189 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 C11orf49Q9H6J7 331 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 TMEM5Q9Y2B1 443 aa17.52■□□□□ 0.4
SCARF1-202ENST00000348987 GPR37L1O60883 481 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 CD3GP09693 182 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 PBLDP30039 288 aaPredicted RBP17.51■□□□□ 0.39
SCARF1-202ENST00000348987 LCN1P31025 176 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 MNX1P50219 401 aaPredicted RBP17.51■□□□□ 0.39
SCARF1-202ENST00000348987 ZNF791Q3KP31 576 aaPredicted RBP17.51■□□□□ 0.39
SCARF1-202ENST00000348987 RASSF6Q6ZTQ3 369 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 METTL3Q86U44 580 aaKnown RBP17.51■□□□□ 0.39
SCARF1-202ENST00000348987 STPG2Q8N412 459 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 CYB5D2Q8WUJ1 264 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 PPCDCQ96CD2 204 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 CHFRQ96EP1 664 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 WASH6PQ9NQA3 447 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 NLGN3Q9NZ94 848 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 SH2B3Q9UQQ2 575 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 EXOSC1Q9Y3B2 195 aaKnown RBP17.51■□□□□ 0.39
SCARF1-202ENST00000348987 C5orf58C9J3I9 102 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 LEFTY1O75610 366 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 IMPA1P29218 277 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 TSTA3Q13630 321 aaPredicted RBP17.51■□□□□ 0.39
SCARF1-202ENST00000348987 OPCMLQ14982 345 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 PODNL1Q6PEZ8 512 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 RASGRP3Q8IV61 690 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 RASGEF1AQ8N9B8 481 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 SLC38A5Q8WUX1 472 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 NEIL2Q969S2 332 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 RADILQ96JH8 1075 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 SFXN2Q96NB2 322 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 EGLN3Q9H6Z9 239 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 BRD7Q9NPI1 651 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 SESN1Q9Y6P5 492 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 POM121CA8CG34 1229 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 H0YIV9 168 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 SLC16A5O15375 505 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 UGDHO60701 494 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 MMP20O60882 483 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 TSPAN5P62079 268 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 CDK5Q00535 292 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 ZNF33BQ06732 778 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 ZNF763Q0D2J5 394 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 ZNF155Q12901 538 aaPredicted RBP17.51■□□□□ 0.39
SCARF1-202ENST00000348987 VASNQ6EMK4 673 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 NLRC3Q7RTR2 1065 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 CLP1Q92989 425 aaKnown RBP17.51■□□□□ 0.39
SCARF1-202ENST00000348987 SECISBP2Q96T21 854 aaKnown RBP17.51■□□□□ 0.39
SCARF1-202ENST00000348987 BRF2Q9HAW0 419 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 MRPS18AQ9NVS2 196 aaKnown RBP17.51■□□□□ 0.39
SCARF1-202ENST00000348987 OR6C2Q9NZP2 312 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 BAIAP2Q9UQB8 552 aa17.51■□□□□ 0.39
SCARF1-202ENST00000348987 HELZP42694 1942 aaKnown RBP17.5■□□□□ 0.39
SCARF1-202ENST00000348987 A0A1W2PRB8 838 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 NPC1O15118 1278 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 HPXP02790 462 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 FURINP09958 794 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 MMP12P39900 470 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 RFX3P48380 749 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 TAP2Q03519 686 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 ARSIQ5FYB1 569 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 WASH2PQ6VEQ5 465 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 UBE2Q1Q7Z7E8 422 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 OAFQ86UD1 273 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 IQCHQ86VS3 1027 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 SIAH3Q8IW03 269 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 TOMM5Q8N4H5 51 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 ZNF527Q8NB42 609 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 ACOT12Q8WYK0 555 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 ZNF436Q9C0F3 470 aaPredicted RBP17.5■□□□□ 0.39
SCARF1-202ENST00000348987 SPRTNQ9H040 489 aaPredicted RBP17.5■□□□□ 0.39
SCARF1-202ENST00000348987 LDAHQ9H6V9 325 aa17.5■□□□□ 0.39
SCARF1-202ENST00000348987 CSNK1G3Q9Y6M4 447 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms