RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 FNDC7Q5VTL7 733 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 ANKRD26P1Q6NSI1 321 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 CCDC116Q8IYX3 515 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 VWA5B2Q8N398 1253 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 MARVELD2Q8N4S9 558 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 TMEM251Q8N6I4 163 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 RNF148Q8N7C7 305 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 OR52R1Q8NGF1 315 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 OR5L2Q8NGL0 311 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 PAQR8Q8TEZ7 354 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 PHF12Q96QT6 1004 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 PELOQ9BRX2 385 aaKnown RBP14.77□□□□□ -0.05
RAB5C-201ENST00000346213 DPY30Q9C005 99 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 DEFB127Q9H1M4 99 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 ZDHHC11Q9H8X9 412 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 NCKAP5O14513 1909 aa14.77□□□□□ -0.05
RAB5C-201ENST00000346213 NUP214P35658 2090 aaPredicted RBP14.76□□□□□ -0.05
RAB5C-201ENST00000346213 A0A1B0GTH9 108 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 GNG14A0A1W2PPG7 69 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 CDK2AP1O14519 115 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 SLC6A2P23975 617 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 CALRP27797 417 aaKnown RBP14.76□□□□□ -0.05
RAB5C-201ENST00000346213 MAGEA5P43359 124 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 CLDN8P56748 225 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 PTGR1Q14914 329 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 TIGD2Q4W5G0 525 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 ZNF787Q6DD87 383 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 NPSR1Q6W5P4 371 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 SPPL2CQ8IUH8 684 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 GPALPP1Q8IXQ4 340 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 SLC15A3Q8IY34 581 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 OR7G2Q8NG99 324 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 CDC26Q8NHZ8 85 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 ITLN2Q8WWU7 325 aaPredicted RBP14.76□□□□□ -0.05
RAB5C-201ENST00000346213 CXorf56Q9H5V9 222 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 IL1RL2Q9HB29 575 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 TIMMDC1Q9NPL8 285 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 EHD3Q9NZN3 535 aa14.76□□□□□ -0.05
RAB5C-201ENST00000346213 C2orf92A0A1B0GVN3 265 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 NME4O00746 187 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 TFECO14948 347 aaPredicted RBP14.75□□□□□ -0.05
RAB5C-201ENST00000346213 IL6P05231 212 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 GRNP28799 593 aaKnown RBP14.75□□□□□ -0.05
RAB5C-201ENST00000346213 VHLP40337 213 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 ERFP50548 548 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 BIKQ13323 160 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 NTRK2Q16620 822 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 NOXRED1Q6NXP6 359 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 OPN5Q6U736 354 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 DOLPP1Q86YN1 238 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 TICAM1Q8IUC6 712 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 LRRC25Q8N386 305 aaPredicted RBP14.75□□□□□ -0.05
RAB5C-201ENST00000346213 GOLM1Q8NBJ4 401 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 HIPK4Q8NE63 616 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 CLHC1Q8NHS4 586 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 PYDC1Q8WXC3 89 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 ART5Q96L15 291 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 ANKRD27Q96NW4 1050 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 SLC39A3Q9BRY0 314 aa14.75□□□□□ -0.05
RAB5C-201ENST00000346213 CENPEQ02224 2701 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 C15orf38-AP3S2A0A0A6YYH1 394 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 OR6C76A6NM76 312 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 CDC40O60508 579 aaKnown RBP eCLIP14.74□□□□□ -0.05
RAB5C-201ENST00000346213 HSD17B1P14061 328 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 SDC1P18827 310 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 CSNK2A2P19784 350 aaPredicted RBP14.74□□□□□ -0.05
RAB5C-201ENST00000346213 CNR1P21554 472 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 MSX2P35548 267 aaPredicted RBP14.74□□□□□ -0.05
RAB5C-201ENST00000346213 PTGDSP41222 190 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 CLNS1AP54105 237 aaKnown RBP14.74□□□□□ -0.05
RAB5C-201ENST00000346213 PPIAP62937 165 aaKnown RBP14.74□□□□□ -0.05
RAB5C-201ENST00000346213 ZFP1Q6P2D0 407 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 LRRC74BQ6ZQY2 392 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 SLC29A4Q7RTT9 530 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 ARPINQ7Z6K5 226 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 FAM156AQ8NDB6 213 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 GFM2Q969S9 779 aaKnown RBP14.74□□□□□ -0.05
RAB5C-201ENST00000346213 MYNNQ9NPC7 610 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 SLC35C2Q9NQQ7 365 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 CMTM6Q9NX76 183 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 C15orf41Q9Y2V0 281 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 EXPH5Q8NEV8 1989 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 KLRC4-KLRK1H3BQV0 150 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 CCL21O00585 134 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 TCN1P20061 433 aaPredicted RBP14.74□□□□□ -0.05
RAB5C-201ENST00000346213 DDCP20711 480 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 ABCD3P28288 659 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 DGKQP52824 942 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 SESN3P58005 492 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 ZNF763Q0D2J5 394 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 CAPRIN1Q14444 709 aaKnown RBP14.74□□□□□ -0.05
RAB5C-201ENST00000346213 SLC2A7Q6PXP3 512 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 DLEU7Q6UYE1 221 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 WDR53Q7Z5U6 358 aaPredicted RBP14.74□□□□□ -0.05
RAB5C-201ENST00000346213 DHDDSQ86SQ9 333 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 BHLHE22Q8NFJ8 381 aaPredicted RBP14.74□□□□□ -0.05
RAB5C-201ENST00000346213 NRG4Q8WWG1 115 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 HGDQ93099 445 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 NODALQ96S42 347 aa14.74□□□□□ -0.05
RAB5C-201ENST00000346213 SACM1LQ9NTJ5 587 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms