RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 C1GALT1C1LP0DN25 315 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 GNRHRP30968 328 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 ERVK-21P61565 698 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 SCAPQ12770 1279 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 SLAIN1Q8ND83 568 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 STEAP2Q8NFT2 490 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 C10orf90Q96M02 699 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 DPEP2Q9H4A9 486 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 IL21RQ9HBE5 538 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 GPATCH2Q9NW75 528 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 SYN1P17600 705 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 ACRV1P26436 265 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 BAK1Q16611 211 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 UGT3A2Q3SY77 523 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 UMODL1-AS1Q8N2C9 162 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 ZNF709Q8N972 641 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 SETD7Q8WTS6 366 aaKnown RBP11.48□□□□□ -0.57
COL12A1-202ENST00000345356 ECHDC3Q96DC8 303 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 NUS1Q96E22 293 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 SRA1Q9HD15 236 aaKnown RBP11.48□□□□□ -0.57
COL12A1-202ENST00000345356 LSM5Q9Y4Y9 91 aaKnown RBP11.48□□□□□ -0.57
COL12A1-202ENST00000345356 H3BUI4 141 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 ADH1CP00326 375 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 PSMB1P20618 241 aaKnown RBP11.48□□□□□ -0.57
COL12A1-202ENST00000345356 METTL2BQ6P1Q9 378 aaKnown RBP11.48□□□□□ -0.57
COL12A1-202ENST00000345356 CLEC14AQ86T13 490 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 FAM124AQ86V42 546 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 DYNC2LI1Q8TCX1 351 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 SCARB1Q8WTV0 552 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 ADAMTS14Q8WXS8 1223 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 METTL2AQ96IZ6 378 aaKnown RBP11.48□□□□□ -0.57
COL12A1-202ENST00000345356 ZNF583Q96ND8 569 aa11.48□□□□□ -0.57
COL12A1-202ENST00000345356 POP7O75817 140 aaKnown RBP11.47□□□□□ -0.57
COL12A1-202ENST00000345356 CLEC2LP0C7M8 214 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 SDC1P18827 310 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 GABRA5P31644 462 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 PPT1P50897 306 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 ITPRIPL2Q3MIP1 535 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 KCTD18Q6PI47 426 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-202ENST00000345356 TSSK4Q6SA08 328 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 MEX3DQ86XN8 651 aaKnown RBP11.47□□□□□ -0.57
COL12A1-202ENST00000345356 CCDC71Q8IV32 467 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-202ENST00000345356 SLC16A10Q8TF71 515 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 ZBTB8AQ96BR9 441 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 RNF167Q9H6Y7 350 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 DDX31Q9H8H2 851 aaKnown RBP11.47□□□□□ -0.57
COL12A1-202ENST00000345356 MED6O75586 246 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 HRH2P25021 359 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 ASAH1Q13510 395 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 FUT10Q6P4F1 479 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 PTRH1Q86Y79 214 aaKnown RBP11.47□□□□□ -0.57
COL12A1-202ENST00000345356 OR6V1Q8N148 313 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 NUP43Q8NFH3 380 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 OR4E2Q8NGC2 313 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 OR4K13Q8NH42 304 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 ELP5Q8TE02 316 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 FOXRED1Q96CU9 486 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-202ENST00000345356 C1orf74Q96LT6 269 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-202ENST00000345356 LIPT1Q9Y234 373 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 ATG4BQ9Y4P1 393 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 TIMM8BQ9Y5J9 83 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-202ENST00000345356 C2orf78A6NCI8 922 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 NPIPA5E9PKD4 350 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 SLC16A5O15375 505 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 CLDN10P78369 228 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 PLK5Q496M5 336 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 SLC24A5Q71RS6 500 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 SLC29A4Q7RTT9 530 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 FAM86B1Q8N7N1 296 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 OR5AK2Q8NH90 309 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 TFGQ92734 400 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-202ENST00000345356 SMARCD2Q92925 531 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 NPIPA1Q9UND3 350 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 HYKKA2RU49 373 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 ADAM12O43184 909 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 RAF1P04049 648 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 PRKCAP17252 672 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 RPS19P39019 145 aaKnown RBP11.47□□□□□ -0.57
COL12A1-202ENST00000345356 SLAMF1Q13291 335 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 SLC9B2Q86UD5 537 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 CELF5Q8N6W0 485 aaKnown RBP11.47□□□□□ -0.57
COL12A1-202ENST00000345356 OR2T11Q8NH01 316 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 HRASLS5Q96KN8 279 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 PPP4R1LQ9P1A2 415 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 COL1A1P02452 1464 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-202ENST00000345356 ZNF736B4DX44 427 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-202ENST00000345356 ISL1P61371 349 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 PSPHP78330 225 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 ARSIQ5FYB1 569 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 CD276Q5ZPR3 534 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 B3GLCTQ6Y288 498 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 KANSL1Q7Z3B3 1105 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 OR51L1Q8NGJ5 315 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 DUSP19Q8WTR2 217 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 MALSU1Q96EH3 234 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 HIST1H2AAQ96QV6 131 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 TBL1XR1Q9BZK7 514 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 TMEM14AQ9Y6G1 99 aa11.47□□□□□ -0.57
COL12A1-202ENST00000345356 UNCXA6NJT0 531 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms