RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 FAM120BQ96EK7 910 aaKnown RBP12.72□□□□□ -0.37
TPM4-202ENST00000344824 TPT1P8Q9HAU6 139 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 C3orf14Q9HBI5 128 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 TIMMDC1Q9NPL8 285 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 DDX18Q9NVP1 670 aaKnown RBP12.72□□□□□ -0.37
TPM4-202ENST00000344824 MAT2BQ9NZL9 334 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 SEC14L3Q9UDX4 400 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 NPIPA1Q9UND3 350 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 DNAJC13O75165 2243 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 ZNF407Q9C0G0 2248 aa12.72□□□□□ -0.37
TPM4-202ENST00000344824 USP9YO00507 2555 aaPredicted RBP12.71□□□□□ -0.37
TPM4-202ENST00000344824 TMEM200CA6NKL6 621 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 EVPLLA8MZ36 301 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 TFECO14948 347 aaPredicted RBP12.71□□□□□ -0.37
TPM4-202ENST00000344824 EMC8O43402 210 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 NME6O75414 186 aaPredicted RBP12.71□□□□□ -0.37
TPM4-202ENST00000344824 RPS26P62854 115 aaKnown RBP12.71□□□□□ -0.37
TPM4-202ENST00000344824 PRICKLE4Q2TBC4 344 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 TRMT12Q53H54 448 aaKnown RBP12.71□□□□□ -0.37
TPM4-202ENST00000344824 ZNF628Q5EBL2 1059 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.71□□□□□ -0.37
TPM4-202ENST00000344824 HLA-DQA1Q5Y7H0 255 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 C6orf120Q7Z4R8 191 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 ZNF227Q86WZ6 799 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 RNF130Q86XS8 419 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 VWA5B2Q8N398 1253 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 FAM156AQ8NDB6 213 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 PSD4Q8NDX1 1056 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 SIMC1Q8NDZ2 872 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 NUP43Q8NFH3 380 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 OR8J3Q8NGG0 315 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 OR8K3Q8NH51 312 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 OR10A6Q8NH74 314 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 FBXO30Q8TB52 745 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 CCDC124Q96CT7 223 aaKnown RBP12.71□□□□□ -0.37
TPM4-202ENST00000344824 OTUB1Q96FW1 271 aaPredicted RBP12.71□□□□□ -0.37
TPM4-202ENST00000344824 SLC35G5Q96KT7 338 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 FRMD6Q96NE9 622 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 BARD1Q99728 777 aaKnown RBP12.71□□□□□ -0.37
TPM4-202ENST00000344824 ECSITQ9BQ95 431 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 YIPF4Q9BSR8 244 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 TMEM181Q9P2C4 612 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 BCAP29Q9UHQ4 241 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 PRPF19Q9UMS4 504 aaKnown RBP12.71□□□□□ -0.37
TPM4-202ENST00000344824 USP22Q9UPT9 525 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 PCDHGB6Q9Y5F9 930 aa12.71□□□□□ -0.37
TPM4-202ENST00000344824 FREM3P0C091 2139 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 NCKAP5O14513 1909 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 KLRC4-KLRK1H3BQV0 150 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 PEX1O43933 1283 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 KRT75O95678 551 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 IGKV3-11P04433 115 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 NQO1P15559 274 aaKnown RBP12.71□□□□□ -0.38
TPM4-202ENST00000344824 MSX2P35548 267 aaPredicted RBP12.71□□□□□ -0.38
TPM4-202ENST00000344824 CRATP43155 626 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 SLC37A1P57057 533 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 PRR5P85299 388 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 PLGLB1Q02325 96 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 LIPEQ05469 1076 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 CEACAM7Q14002 265 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 EBPQ15125 230 aaKnown RBP12.71□□□□□ -0.38
TPM4-202ENST00000344824 COX20Q5RI15 118 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 C1QL3Q5VWW1 255 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 SAXO2Q658L1 398 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 ZNF324BQ6AW86 544 aaPredicted RBP12.71□□□□□ -0.38
TPM4-202ENST00000344824 TNFAIP8L2Q6P589 184 aaPredicted RBP12.71□□□□□ -0.38
TPM4-202ENST00000344824 OPN5Q6U736 354 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 TMEM64Q6YI46 380 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 SULF2Q8IWU5 870 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 ULK2Q8IYT8 1036 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 ARHGAP24Q8N264 748 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 ARMC10Q8N2F6 343 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 C10orf111Q8N326 155 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 FAM13CQ8NE31 585 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 PSMA8Q8TAA3 256 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 NUBPLQ8TB37 319 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 SFXN5Q8TD22 340 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 SSC4DQ8WTU2 575 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 UTP4Q969X6 686 aaKnown RBP12.71□□□□□ -0.38
TPM4-202ENST00000344824 SH3GL1Q99961 368 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 WWTR1Q9GZV5 400 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 CXorf21Q9HAI6 301 aa12.71□□□□□ -0.38
TPM4-202ENST00000344824 TRGV8A0A0C4DH27 118 aa12.7□□□□□ -0.38
TPM4-202ENST00000344824 C2orf92A0A1B0GVN3 265 aa12.7□□□□□ -0.38
TPM4-202ENST00000344824 UPK1AO00322 258 aa12.7□□□□□ -0.38
TPM4-202ENST00000344824 CDC40O60508 579 aaKnown RBP eCLIP12.7□□□□□ -0.38
TPM4-202ENST00000344824 ZNF354AO60765 605 aaPredicted RBP12.7□□□□□ -0.38
TPM4-202ENST00000344824 ETFAP13804 333 aa12.7□□□□□ -0.38
TPM4-202ENST00000344824 PPIBP23284 216 aaKnown RBP12.7□□□□□ -0.38
TPM4-202ENST00000344824 SOX18P35713 384 aa12.7□□□□□ -0.38
TPM4-202ENST00000344824 NR0B1P51843 470 aaKnown RBP12.7□□□□□ -0.38
TPM4-202ENST00000344824 RBPJQ06330 500 aa12.7□□□□□ -0.38
TPM4-202ENST00000344824 MGAT2Q10469 447 aa12.7□□□□□ -0.38
TPM4-202ENST00000344824 LASP1Q14847 261 aaKnown RBP12.7□□□□□ -0.38
TPM4-202ENST00000344824 NNATQ16517 81 aa12.7□□□□□ -0.38
TPM4-202ENST00000344824 CYP51A1Q16850 503 aa12.7□□□□□ -0.38
TPM4-202ENST00000344824 SAMD4BQ5PRF9 694 aaKnown RBP12.7□□□□□ -0.38
TPM4-202ENST00000344824 WDR53Q7Z5U6 358 aaPredicted RBP12.7□□□□□ -0.38
TPM4-202ENST00000344824 FJX1Q86VR8 437 aa12.7□□□□□ -0.38
TPM4-202ENST00000344824 GPALPP1Q8IXQ4 340 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms