RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 KLHL28Q9NXS3 571 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 C19orf25Q9UFG5 118 aaPredicted RBP16.1■□□□□ 0.17
CLDN4-201ENST00000340958 NXT1Q9UKK6 140 aaKnown RBP16.1■□□□□ 0.17
CLDN4-201ENST00000340958 WASF3Q9UPY6 502 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 DTX4Q9Y2E6 619 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 IFT52Q9Y366 437 aa16.1■□□□□ 0.17
CLDN4-201ENST00000340958 SEC16AO15027 2179 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 CCDC187A0A096LP49 1063 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 PLD2O14939 933 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 ETV5P41161 510 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 EFNA3P52797 238 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 IST1P53990 364 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 PSG6Q00889 435 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 SPIBQ01892 262 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 FOXD4Q12950 439 aaPredicted RBP16.09■□□□□ 0.17
CLDN4-201ENST00000340958 DEF8Q6ZN54 512 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 FRRS1Q6ZNA5 592 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 ANKRD37Q7Z713 158 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 CARM1Q86X55 608 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 ZNF619Q8N2I2 560 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 SVOPLQ8N434 492 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 ZNF321PQ8N8H1 164 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 GPR32P1Q8NGA4 272 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 OR5K1Q8NHB7 308 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 MAGEE2Q8TD90 523 aaPredicted RBP16.09■□□□□ 0.17
CLDN4-201ENST00000340958 PINK1Q9BXM7 581 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 ZNF350Q9GZX5 532 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 SLC26A1Q9H2B4 701 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 AKIRIN1Q9H9L7 192 aaPredicted RBP16.09■□□□□ 0.17
CLDN4-201ENST00000340958 THSD1Q9NS62 852 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 NDUFAF4Q9P032 175 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 SAMHD1Q9Y3Z3 626 aaKnown RBP16.09■□□□□ 0.17
CLDN4-201ENST00000340958 TESMINQ9Y4I5 508 aa16.09■□□□□ 0.17
CLDN4-201ENST00000340958 FRYQ5TBA9 3013 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 IGHV3-20A0A0C4DH32 117 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 TEX51A0A1B0GUA7 166 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 VSTM2BA6NLU5 285 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 ADAMDEC1O15204 470 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 BRINP1O60477 761 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 STK17BO94768 372 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 KCNK2O95069 426 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 RASAL1O95294 804 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 CAPNS1P04632 268 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 ZNF26P17031 533 aaPredicted RBP16.08■□□□□ 0.17
CLDN4-201ENST00000340958 RRM2P31350 389 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 HSPA13P48723 471 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 SLC37A1P57057 533 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 FOXK2Q01167 660 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 EIF3IQ13347 325 aaKnown RBP16.08■□□□□ 0.17
CLDN4-201ENST00000340958 FLYWCH1Q4VC44 716 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 EXOSC6Q5RKV6 272 aaKnown RBP16.08■□□□□ 0.17
CLDN4-201ENST00000340958 SLC29A4Q7RTT9 530 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 VRK2Q86Y07 508 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 HIPK1Q86Z02 1210 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 EPHX4Q8IUS5 362 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 PACRGLQ8N7B6 248 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 MORN4Q8NDC4 146 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 OR4N2Q8NGD1 307 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 ZNF721Q8TF20 911 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 ZG16BQ96DA0 208 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 ZNF300Q96RE9 604 aaPredicted RBP16.08■□□□□ 0.17
CLDN4-201ENST00000340958 G6PC3Q9BUM1 346 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 AMBRA1Q9C0C7 1298 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 Q9H521 79 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 WDR54Q9H977 334 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 CBLCQ9ULV8 474 aa16.08■□□□□ 0.17
CLDN4-201ENST00000340958 NUP210LQ5VU65 1888 aa16.08■□□□□ 0.16
CLDN4-201ENST00000340958 EI24O14681 340 aa16.08■□□□□ 0.16
CLDN4-201ENST00000340958 PRSS23O95084 383 aa16.08■□□□□ 0.16
CLDN4-201ENST00000340958 DDAH2O95865 285 aa16.08■□□□□ 0.16
CLDN4-201ENST00000340958 DNAJA1P31689 397 aaKnown RBP16.08■□□□□ 0.16
CLDN4-201ENST00000340958 TRHRP34981 398 aaPredicted RBP16.08■□□□□ 0.16
CLDN4-201ENST00000340958 MAP3K8P41279 467 aa16.08■□□□□ 0.16
CLDN4-201ENST00000340958 C3orf38Q5JPI3 329 aa16.08■□□□□ 0.16
CLDN4-201ENST00000340958 PPP4R4Q6NUP7 873 aa16.08■□□□□ 0.16
CLDN4-201ENST00000340958 ZNF614Q8N883 585 aa16.08■□□□□ 0.16
CLDN4-201ENST00000340958 SPSB2Q99619 263 aa16.08■□□□□ 0.16
CLDN4-201ENST00000340958 PIP5K1AQ99755 562 aa16.08■□□□□ 0.16
CLDN4-201ENST00000340958 NUDT9Q9BW91 350 aa16.08■□□□□ 0.16
CLDN4-201ENST00000340958 POLE3Q9NRF9 147 aa16.08■□□□□ 0.16
CLDN4-201ENST00000340958 ENPP4Q9Y6X5 453 aa16.08■□□□□ 0.16
CLDN4-201ENST00000340958 DSPPQ9NZW4 1301 aa16.07■□□□□ 0.16
CLDN4-201ENST00000340958 CHD8Q9HCK8 2581 aa16.07■□□□□ 0.16
CLDN4-201ENST00000340958 C2orf92A0A1B0GVN3 265 aa16.07■□□□□ 0.16
CLDN4-201ENST00000340958 TNFRSF11BO00300 401 aa16.07■□□□□ 0.16
CLDN4-201ENST00000340958 DBIP07108 87 aaKnown RBP16.07■□□□□ 0.16
CLDN4-201ENST00000340958 ACADSP16219 412 aa16.07■□□□□ 0.16
CLDN4-201ENST00000340958 PRKAR1BP31321 381 aa16.07■□□□□ 0.16
CLDN4-201ENST00000340958 MRPL14Q6P1L8 145 aaKnown RBP16.07■□□□□ 0.16
CLDN4-201ENST00000340958 C6orf15Q6UXA7 325 aaPredicted RBP16.07■□□□□ 0.16
CLDN4-201ENST00000340958 NPSR1Q6W5P4 371 aa16.07■□□□□ 0.16
CLDN4-201ENST00000340958 OR1N1Q8NGS0 311 aa16.07■□□□□ 0.16
CLDN4-201ENST00000340958 WDR36Q8NI36 951 aaKnown RBP16.07■□□□□ 0.16
CLDN4-201ENST00000340958 HOXB13Q92826 284 aaPredicted RBP16.07■□□□□ 0.16
CLDN4-201ENST00000340958 DDA1Q9BW61 102 aa16.07■□□□□ 0.16
CLDN4-201ENST00000340958 SCNM1Q9BWG6 230 aa16.07■□□□□ 0.16
CLDN4-201ENST00000340958 ARMC7Q9H6L4 198 aa16.07■□□□□ 0.16
CLDN4-201ENST00000340958 FBXO34Q9NWN3 711 aa16.07■□□□□ 0.16
CLDN4-201ENST00000340958 KLK13Q9UKR3 277 aa16.07■□□□□ 0.16
CLDN4-201ENST00000340958 PADI1Q9ULC6 663 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms