RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 ZNF840PA6NDX5 716 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 GPR31O00270 319 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 HIST1H2AGP0C0S8 130 aaPredicted RBP11.87□□□□□ -0.51
DFFB-202ENST00000339350 ZDHHC11BP0C7U3 371 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 HOXB9P17482 250 aaPredicted RBP11.87□□□□□ -0.51
DFFB-202ENST00000339350 HIST1H2ADP20671 130 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 OR1D2P34982 312 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 CHIT1Q13231 466 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 TSTA3Q13630 321 aaPredicted RBP11.87□□□□□ -0.51
DFFB-202ENST00000339350 RAB33AQ14088 237 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 ADGRF1Q5T601 910 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 HIST2H2AA3Q6FI13 130 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 CNIH2Q6PI25 160 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 C19orf48Q6RUI8 117 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 PRSS58Q8IYP2 241 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 OR9Q2Q8NGE9 314 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 OTUB1Q96FW1 271 aaPredicted RBP11.87□□□□□ -0.51
DFFB-202ENST00000339350 HIST1H2AHQ96KK5 128 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 COPS8Q99627 209 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 HIST1H2AJQ99878 128 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 NIPSNAP1Q9BPW8 284 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 ZNF334Q9HCZ1 680 aaPredicted RBP11.87□□□□□ -0.51
DFFB-202ENST00000339350 RHCGQ9UBD6 479 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 DHCR7Q9UBM7 475 aaKnown RBP11.87□□□□□ -0.51
DFFB-202ENST00000339350 EXTL2Q9UBQ6 330 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 FZD4Q9ULV1 537 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 CLEC4EQ9ULY5 219 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 DOCK6Q96HP0 2047 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 NPIPB15A6NHN6 443 aaPredicted RBP11.87□□□□□ -0.51
DFFB-202ENST00000339350 HLA-DQB1P01920 261 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 ZNF8P17098 575 aaPredicted RBP11.87□□□□□ -0.51
DFFB-202ENST00000339350 AMD1P17707 334 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 LCN1P31025 176 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 CDH12P55289 794 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 ATP13A5Q4VNC0 1218 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 ZCCHC12Q6PEW1 402 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 CERS6Q6ZMG9 384 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 ASB18Q6ZVZ8 466 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 ZNF367Q7RTV3 350 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 ZNF605Q86T29 641 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 SLC5A8Q8N695 610 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 NANOGP1Q8N7R0 232 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 OR52E4Q8NGH9 312 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 TRMT10AQ8TBZ6 339 aaKnown RBP11.87□□□□□ -0.51
DFFB-202ENST00000339350 GTPBP3Q969Y2 492 aaKnown RBP11.87□□□□□ -0.51
DFFB-202ENST00000339350 RAD9AQ99638 391 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 TPT1P8Q9HAU6 139 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 MARCH5Q9NX47 278 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 PLEKHB1Q9UF11 243 aaPredicted RBP11.87□□□□□ -0.51
DFFB-202ENST00000339350 SPEGQ15772 3267 aa11.87□□□□□ -0.51
DFFB-202ENST00000339350 TMEM200CA6NKL6 621 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 GP1BAP07359 652 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 ATP5A1P25705 553 aaKnown RBP11.86□□□□□ -0.51
DFFB-202ENST00000339350 CAV3P56539 151 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 BCL2L1Q07817 233 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 GANABQ14697 944 aaKnown RBP11.86□□□□□ -0.51
DFFB-202ENST00000339350 GRIN2CQ14957 1233 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 DUOXA1Q1HG43 343 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 RAET1GQ6H3X3 334 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 FAM198BQ6UWH4 519 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 SEZ6L2Q6UXD5 910 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 OR1S1Q8NH92 325 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 ZNF707Q96C28 371 aaPredicted RBP11.86□□□□□ -0.51
DFFB-202ENST00000339350 ALX4Q9H161 411 aaPredicted RBP11.86□□□□□ -0.51
DFFB-202ENST00000339350 HHATLQ9HCP6 504 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 FAM227AF5H4B4 570 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 PCDH7O60245 1069 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 SDC3O75056 442 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 AKR7A3O95154 331 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 PTBP1P26599 531 aaKnown RBP eCLIP11.86□□□□□ -0.511e-7■□□□□ 11.3
DFFB-202ENST00000339350 VEGFCP49767 419 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 WNT3P56703 355 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 BTG1P62324 171 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 TPGS1Q6ZTW0 290 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 LDLRAD3Q86YD5 345 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 NAGSQ8N159 534 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 OR14A16Q8NHC5 309 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 ELMOD3Q96FG2 381 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 ZC3H10Q96K80 434 aaKnown RBP11.86□□□□□ -0.51
DFFB-202ENST00000339350 CAPNS2Q96L46 248 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 DDOQ99489 341 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 GABARAPL1Q9H0R8 117 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 SH3BP4Q9P0V3 963 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 ACSL6Q9UKU0 697 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 ZNF670-ZNF695F2Z2N8 137 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 TNFRSF11BO00300 401 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 LDLRAD4O15165 306 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 RECKO95980 971 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 TRBC1P01850 177 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 ALDOBP05062 364 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 CRATP43155 626 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 STK19P49842 368 aaPredicted RBP11.86□□□□□ -0.51
DFFB-202ENST00000339350 CARD18P57730 90 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 SMAD3P84022 425 aaKnown RBP11.86□□□□□ -0.51
DFFB-202ENST00000339350 B4GALNT1Q00973 533 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 GAB1Q13480 694 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 MRPL58Q14197 206 aaKnown RBP11.86□□□□□ -0.51
DFFB-202ENST00000339350 GPR176Q14439 515 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 MICBQ29980 383 aa11.86□□□□□ -0.51
DFFB-202ENST00000339350 AVPI1Q5T686 147 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms