RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SAGE2PA6NJ88 616 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 NPIPA7E9PJI5 369 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PDLIM1O00151 329 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 TM4SF5O14894 197 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 KLF7O75840 302 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 IGKV1D-16P01601 117 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 NPIPA8P0DM63 369 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZNF23P17027 643 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 YAP1P46937 504 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 GPR143P51810 404 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 OR2T5Q6IEZ7 315 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PAPD4Q6PIY7 484 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZAR1Q86SH2 424 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 C9orf40Q8IXQ3 194 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PEX5LQ8IYB4 626 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 OR2T29Q8NH02 315 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 APOBEC4Q8WW27 367 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 BTBD9Q96Q07 612 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 GAL3ST4Q96RP7 486 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SLC29A1Q99808 456 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 WDR77Q9BQA1 342 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 WFDC6Q9BQY6 131 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PINK1Q9BXM7 581 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 AMBRA1Q9C0C7 1298 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SAP130Q9H0E3 1048 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 NDUFAF4Q9P032 175 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 C19orf25Q9UFG5 118 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CBLCQ9ULV8 474 aa13.66□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CENPVL1A0A0U1RR11 272 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 C2orf92A0A1B0GVN3 265 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SEC24DO94855 1032 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 TNFSF15O95150 251 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 EPPINO95925 133 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 UMODP07911 640 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CYC1P08574 325 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZNF26P17031 533 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PIGAP37287 484 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PPICP45877 212 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZBTB49Q6ZSB9 765 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CARM1Q86X55 608 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZSCAN1Q8NBB4 408 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 NFAM1Q8NET5 270 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 B3GNT7Q8NFL0 401 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 OR4D11Q8NGI4 311 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 VANGL1Q8TAA9 524 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ADIPOR1Q96A54 375 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 LPAR4Q99677 370 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 NXF5Q9H1B4 397 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 TRIM45Q9H8W5 580 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 THSD1Q9NS62 852 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 VNN3Q9NY84 501 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 U3KQV3 271 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 J3KTA2 159 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 DLL1O00548 723 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 PEX12O00623 359 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SOCS2O14508 198 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ACOX3O15254 700 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 KIAA0513O60268 411 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 LGI1O95970 557 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 IFNW1P05000 195 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 IL7RP16871 459 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ITGA2P17301 1181 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 TCN2P20062 427 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ATP6V1C1P21283 382 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 AQP4P55087 323 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 KCNC4Q03721 635 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 EBPQ15125 230 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 MAPK14Q16539 360 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 NRF1Q16656 503 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 HLA-DQA1Q5Y7H0 255 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 SLC29A4Q7RTT9 530 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 TMEM179BQ7Z7N9 219 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 RBM45Q8IUH3 476 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 LACC1Q8IV20 430 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CBR4Q8N4T8 237 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 BCORP1Q8N888 145 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 OR2Y1Q8NGV0 311 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 LCORQ96JN0 433 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZNF300Q96RE9 604 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 LMF1Q96S06 567 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZNF184Q99676 751 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 C9orf16Q9BUW7 83 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 NRSN2Q9GZP1 204 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 CACYBPQ9HB71 228 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 POLE3Q9NRF9 147 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 KCNE5Q9UJ90 142 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZNF232Q9UNY5 417 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ZNF443Q9Y2A4 671 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 IFT52Q9Y366 437 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 ENPP4Q9Y6X5 453 aa13.65□□□□□ -0.22
CDK5RAP3-201ENST00000338399 AGAP5A6NIR3 686 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 OR6C76A6NM76 312 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 M0R3H8 397 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 E2F6O75461 281 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 CEACAM1P13688 526 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 PRKAR1BP31321 381 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 NOVA1P51513 510 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 NHLH1Q02575 133 aa13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 LARS2Q15031 903 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-201ENST00000338399 FLYWCH1Q4VC44 716 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms