RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 EFHD2Q96C19 240 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-202ENST00000337571 DACH2Q96NX9 599 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 UCN2Q96RP3 112 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 KCNA7Q96RP8 456 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 IQCGQ9H095 443 aaKnown RBP9.67□□□□□ -0.86
CAPN3-202ENST00000337571 C3orf14Q9HBI5 128 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 SIRT5Q9NXA8 310 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 FBXL2Q9UKC9 423 aa9.67□□□□□ -0.86
CAPN3-202ENST00000337571 EIF3LQ9Y262 564 aaKnown RBP9.67□□□□□ -0.86
CAPN3-202ENST00000337571 RPH3AQ9Y2J0 694 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-202ENST00000337571 HRNRQ86YZ3 2850 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-202ENST00000337571 KIAA1549Q9HCM3 1950 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 A0A087WV62 115 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 MYO1GB0I1T2 1018 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 LINC01387J3KSC0 135 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 SCO2O43819 266 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 GLRA3O75311 464 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 NME6O75414 186 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-202ENST00000337571 SMNDC1O75940 238 aaKnown RBP eCLIP9.66□□□□□ -0.86
CAPN3-202ENST00000337571 PEPDP12955 493 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 ZNF708P17019 499 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 HK1P19367 917 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 NTSP30990 170 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 EVI2BP34910 448 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 HTR6P50406 440 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 LHX2P50458 406 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 MMP16P51512 607 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 CCDC153Q494R4 210 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 TMEM107Q6UX40 140 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 UBQLNLQ8IYU4 475 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 GCNT2Q8N0V5 402 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 CCDC63Q8NA47 563 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 OR7G2Q8NG99 324 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 OR4N2Q8NGD1 307 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 FAM76AQ8TAV0 307 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 MBD6Q96DN6 1003 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 ALPK1Q96QP1 1244 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 DSN1Q9H410 356 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 GSTO2Q9H4Y5 243 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 Q9N2J8 555 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 DDX18Q9NVP1 670 aaKnown RBP9.66□□□□□ -0.86
CAPN3-202ENST00000337571 GALNT8Q9NY28 637 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 STOML1Q9UBI4 398 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 PACSIN3Q9UKS6 424 aa9.66□□□□□ -0.86
CAPN3-202ENST00000337571 NIPBLQ6KC79 2804 aaeCLIP9.66□□□□□ -0.86
CAPN3-202ENST00000337571 SETD2Q9BYW2 2564 aaPredicted RBP9.66□□□□□ -0.86
CAPN3-202ENST00000337571 MPDZO75970 2070 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 UQCRHLA0A096LP55 91 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 SH3D21A4FU49 640 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 SLC22A20A6NK97 555 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 A8MXE2 369 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 ZIC3O60481 467 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 SEC22BO75396 215 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 KCNH1O95259 989 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 CRHP06850 196 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 GPC1P35052 558 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 CPOXP36551 454 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 MC3RP41968 323 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 RFX3P48380 749 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 CLDN18P56856 261 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 PSG6Q00889 435 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 GANABQ14697 944 aaKnown RBP9.65□□□□□ -0.86
CAPN3-202ENST00000337571 RAET1LQ5VY80 246 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 FAM219BQ5XKK7 198 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 NOXRED1Q6NXP6 359 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 PAMR1Q6UXH9 720 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 NPSR1Q6W5P4 371 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 ZYG11AQ6WRX3 759 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 TRIM46Q7Z4K8 759 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 RETREG3Q86VR2 466 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 CNEP1R1Q8N9A8 125 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 DUSP19Q8WTR2 217 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 RHOXF2Q9BQY4 288 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 SLC39A3Q9BRY0 314 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 TBL1XR1Q9BZK7 514 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 HHATLQ9HCP6 504 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 NEUROD4Q9HD90 331 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 MYNNQ9NPC7 610 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 TAS2R7Q9NYW3 318 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 ABCG2Q9UNQ0 655 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 C19orf53Q9UNZ5 99 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-202ENST00000337571 POLR3HQ9Y535 204 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-202ENST00000337571 NF1P21359 2839 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 SPG11Q96JI7 2443 aa9.65□□□□□ -0.86
CAPN3-202ENST00000337571 A0A1W2PPM1 405 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 TTC36A6NLP5 189 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 SLC28A1O00337 649 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 UBFD1O14562 309 aaKnown RBP9.64□□□□□ -0.87
CAPN3-202ENST00000337571 MSTNO14793 375 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 RGS14O43566 566 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 FADS1O60427 444 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 RSL1D1O76021 490 aaKnown RBP9.64□□□□□ -0.87
CAPN3-202ENST00000337571 IL33O95760 270 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 TGM6O95932 706 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 UROSP10746 265 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 CPA3P15088 417 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 FOSL1P15407 271 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 GABRA3P34903 492 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 KCNJ5P48544 419 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 GAS1P54826 345 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms