RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 PRR22Q8IZ63 422 aa19.86■□□□□ 0.77
TPM1-204ENST00000334895 OR5L2Q8NGL0 311 aa19.86■□□□□ 0.77
TPM1-204ENST00000334895 TMBIM1Q969X1 311 aa19.86■□□□□ 0.77
TPM1-204ENST00000334895 RSPO3Q9BXY4 272 aaPredicted RBP19.86■□□□□ 0.77
TPM1-204ENST00000334895 DPH1Q9BZG8 443 aa19.86■□□□□ 0.77
TPM1-204ENST00000334895 MYOTQ9UBF9 498 aa19.86■□□□□ 0.77
TPM1-204ENST00000334895 DSPPQ9NZW4 1301 aa19.86■□□□□ 0.77
TPM1-204ENST00000334895 MED13Q9UHV7 2174 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 TMEM247A6NEH6 219 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 MAN1A2O60476 641 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 KDELR2P33947 212 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 EIF2S3P41091 472 aaKnown RBP19.85■□□□□ 0.77
TPM1-204ENST00000334895 ERFP50548 548 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 CHAF1BQ13112 559 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 CCNIQ14094 377 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 KPNB1Q14974 876 aaKnown RBP19.85■□□□□ 0.77
TPM1-204ENST00000334895 CRTC2Q53ET0 693 aaPredicted RBP19.85■□□□□ 0.77
TPM1-204ENST00000334895 PRAMEF8Q5VWM4 474 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 PRAMEF7Q5VXH5 474 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 BHLHE22Q8NFJ8 381 aaPredicted RBP19.85■□□□□ 0.77
TPM1-204ENST00000334895 ZG16BQ96DA0 208 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 HSPBAP1Q96EW2 488 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 CCNL2Q96S94 520 aaPredicted RBP19.85■□□□□ 0.77
TPM1-204ENST00000334895 QRSL1Q9H0R6 528 aaKnown RBP19.85■□□□□ 0.77
TPM1-204ENST00000334895 MKLN1Q9UL63 735 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 ZMIZ1Q9ULJ6 1067 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 ZNF451Q9Y4E5 1061 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 LAMA5O15230 3695 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 EXPH5Q8NEV8 1989 aa19.85■□□□□ 0.77
TPM1-204ENST00000334895 TMEM229AB2RXF0 380 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 ACOX3O15254 700 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 ABCD3P28288 659 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 RFX3P48380 749 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 AP1ARQ63HQ0 302 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 FCRLBQ6BAA4 426 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 HMGN2P46Q86SG4 172 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 KBTBD2Q8IY47 623 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 ARMC10Q8N2F6 343 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 BBS10Q8TAM1 723 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 THAP4Q8WY91 577 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 PSMF1Q92530 271 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 TAMM41Q96BW9 452 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 SAP130Q9H0E3 1048 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 WDR45Q9Y484 360 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 A0A0G2JPF8 293 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 TCRBV5S2A0A599 114 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 ZNF891A8MT65 544 aaPredicted RBP19.84■□□□□ 0.77
TPM1-204ENST00000334895 HNRNPCL2B2RXH8 293 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 HNRNPCL3B7ZW38 293 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 M0QX08 132 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 STX11O75558 287 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 HNRNPCL4P0DMR1 293 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 ACTR3P61158 418 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 CDC20Q12834 499 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 GNA13Q14344 377 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 LRRC23Q53EV4 343 aaPredicted RBP19.84■□□□□ 0.77
TPM1-204ENST00000334895 CRB2Q5IJ48 1285 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 INTS11Q5TA45 600 aaKnown RBP19.84■□□□□ 0.77
TPM1-204ENST00000334895 H3F3CQ6NXT2 135 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 LYPD8Q6UX82 237 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 BRIX1Q8TDN6 353 aaKnown RBP19.84■□□□□ 0.77
TPM1-204ENST00000334895 FAM162AQ96A26 154 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 EFHD2Q96C19 240 aaPredicted RBP19.84■□□□□ 0.77
TPM1-204ENST00000334895 NSMCE2Q96MF7 247 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 CALML5Q9NZT1 146 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 KCNE5Q9UJ90 142 aa19.84■□□□□ 0.77
TPM1-204ENST00000334895 GPC6Q9Y625 555 aaPredicted RBP19.84■□□□□ 0.77
TPM1-204ENST00000334895 NPIPA5A0A0B4J1W7 369 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 CENPVL1A0A0U1RR11 272 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 NPIPA7E9PJI5 369 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 KIAA0513O60268 411 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 OR2J2O76002 312 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 IL33O95760 270 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 OPN1SWP03999 348 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 GUSBP08236 651 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 NPIPA8P0DM63 369 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 HPCAP84074 193 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 DECR1Q16698 335 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.83■□□□□ 0.76
TPM1-204ENST00000334895 DESI1Q6ICB0 168 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 SLC34A3Q8N130 599 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 OR52E4Q8NGH9 312 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 OMA1Q96E52 524 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 FER1L6-AS2Q96M78 137 aa19.83■□□□□ 0.76
TPM1-204ENST00000334895 DCAF13Q9NV06 445 aaKnown RBP19.83■□□□□ 0.76
TPM1-204ENST00000334895 RRP15Q9Y3B9 282 aaKnown RBP19.83■□□□□ 0.76
TPM1-204ENST00000334895 ARGFXA6NJG6 315 aa19.82■□□□□ 0.76
TPM1-204ENST00000334895 TSPAN2O60636 221 aa19.82■□□□□ 0.76
TPM1-204ENST00000334895 SERPINA1P01009 418 aa19.82■□□□□ 0.76
TPM1-204ENST00000334895 ETS2P15036 469 aa19.82■□□□□ 0.76
TPM1-204ENST00000334895 DMTNQ08495 405 aa19.82■□□□□ 0.76
TPM1-204ENST00000334895 PLCXD2Q0VAA5 305 aa19.82■□□□□ 0.76
TPM1-204ENST00000334895 AIMP2Q13155 320 aaKnown RBP19.82■□□□□ 0.76
TPM1-204ENST00000334895 GPR68Q15743 365 aa19.82■□□□□ 0.76
TPM1-204ENST00000334895 B3GNTL1Q67FW5 361 aaPredicted RBP19.82■□□□□ 0.76
TPM1-204ENST00000334895 PATL1Q86TB9 770 aaKnown RBP19.82■□□□□ 0.76
TPM1-204ENST00000334895 SPACA3Q8IXA5 215 aa19.82■□□□□ 0.76
TPM1-204ENST00000334895 ZNF619Q8N2I2 560 aa19.82■□□□□ 0.76
TPM1-204ENST00000334895 FAM86B1Q8N7N1 296 aa19.82■□□□□ 0.76
TPM1-204ENST00000334895 DIO2Q92813 273 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms