RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 OPN5Q6U736 354 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 UBE2Q1Q7Z7E8 422 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 IL17RCQ8NAC3 791 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 PTTG2Q9NZH5 202 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 CBLCQ9ULV8 474 aa14.14□□□□□ -0.15
C9orf47-201ENST00000334490 BLACEA4D250 179 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 DCKP27707 260 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 VBP1P61758 197 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 CBLBQ13191 982 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 SLC5A12Q1EHB4 618 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 HMBOX1Q6NT76 420 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 IL20RBQ6UXL0 311 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 ZER1Q7Z7L7 766 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 ARMC10Q8N2F6 343 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 ENDOVQ8N8Q3 282 aaKnown RBP14.13□□□□□ -0.15
C9orf47-201ENST00000334490 PGAM5Q96HS1 289 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 PINK1Q9BXM7 581 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 CST11Q9H112 138 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 CLMPQ9H6B4 373 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 KIR3DX1Q9H7L2 352 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 ACSS1Q9NUB1 689 aaPredicted RBP14.13□□□□□ -0.15
C9orf47-201ENST00000334490 FAM53CQ9NYF3 392 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 GRXCR2A6NFK2 248 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 CLPXO76031 633 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 UBE2NP61088 152 aaKnown RBP14.13□□□□□ -0.15
C9orf47-201ENST00000334490 HOXC5Q00444 222 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 SCRN3Q0VDG4 424 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 PYCR3Q53H96 274 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 OR5M10Q6IEU7 315 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 LEG1Q6P5S2 330 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 PMM1Q92871 262 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 LYSMD1Q96S90 227 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 CTRCQ99895 268 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 DPH1Q9BZG8 443 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 RXFP3Q9NSD7 469 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 SACM1LQ9NTJ5 587 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 JRKO75564 520 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 NDUFA5Q16718 116 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 SERPINA11Q86U17 422 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 ZNF227Q86WZ6 799 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 ACBD7Q8N6N7 88 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 L3MBTL4Q8NA19 623 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 SP140LQ9H930 580 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 ARID1BQ8NFD5 2236 aaPredicted RBP14.13□□□□□ -0.15
C9orf47-201ENST00000334490 TRIOBPQ9H2D6 2365 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 ARAP2Q8WZ64 1704 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 H3BSA7 217 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 OR2T1O43869 369 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 NDUFB2O95178 105 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 PNMTP11086 282 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 CDKN2CP42773 168 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 DPTQ07507 201 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 TRIM63Q969Q1 353 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 PCDHB16Q9NRJ7 776 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 CNIH4Q9P003 139 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 PRDM4Q9UKN5 801 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 PADI1Q9ULC6 663 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 SLC35A3Q9Y2D2 325 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 CDH10Q9Y6N8 788 aa14.13□□□□□ -0.15
C9orf47-201ENST00000334490 RREB1Q92766 1687 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 AREL1O15033 823 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 CASC3O15234 703 aaKnown RBP14.12□□□□□ -0.15
C9orf47-201ENST00000334490 PPP2CBP62714 309 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 PPP2CAP67775 309 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 TMEM17Q86X19 198 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 CAPSLQ8WWF8 208 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 RADILQ96JH8 1075 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 OR7D2Q96RA2 312 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 SMOXQ9NWM0 555 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 FLRT2O43155 660 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 CBFA2T3O75081 653 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 NPPBP16860 134 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 SLC5A2P31639 672 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 ARHGDIBP52566 201 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 TNFRSF17Q02223 184 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 CARTPTQ16568 116 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 ASB18Q6ZVZ8 466 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 CCDC80Q76M96 950 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 GPALPP1Q8IXQ4 340 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 ZNF300Q96RE9 604 aaPredicted RBP14.12□□□□□ -0.15
C9orf47-201ENST00000334490 MS4A8Q9BY19 250 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 TEX10Q9NXF1 929 aaPredicted RBP14.12□□□□□ -0.15
C9orf47-201ENST00000334490 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.12□□□□□ -0.15
C9orf47-201ENST00000334490 SULT2B1O00204 365 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 ALDOCP09972 364 aaKnown RBP14.12□□□□□ -0.15
C9orf47-201ENST00000334490 GDF1P27539 372 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 ARNTP27540 789 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 REEP5Q00765 189 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 ABCA11PQ4W5N1 156 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 PLBD1Q6P4A8 553 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 WDR20Q8TBZ3 569 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 UBTD2Q8WUN7 234 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 PATE1Q8WXA2 126 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 GTF2H4Q92759 462 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 SAMD8Q96LT4 415 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 DCBLD2Q96PD2 775 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 RBM24Q9BX46 236 aaKnown RBP14.12□□□□□ -0.15
C9orf47-201ENST00000334490 MED28Q9H204 178 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 LTB4R2Q9NPC1 389 aa14.12□□□□□ -0.15
C9orf47-201ENST00000334490 BAIAP2Q9UQB8 552 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms