RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 SPSB2Q99619 263 aa16.14■□□□□ 0.17
PRKCD-201ENST00000330452 EXOSC4Q9NPD3 245 aaKnown RBP16.14■□□□□ 0.17
PRKCD-201ENST00000330452 C14orf105Q9NVL8 296 aa16.14■□□□□ 0.17
PRKCD-201ENST00000330452 NDUFAF4Q9P032 175 aa16.14■□□□□ 0.17
PRKCD-201ENST00000330452 VPS29Q9UBQ0 182 aa16.14■□□□□ 0.17
PRKCD-201ENST00000330452 HS3ST2Q9Y278 367 aa16.14■□□□□ 0.17
PRKCD-201ENST00000330452 DENND4AQ7Z401 1863 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 A0A1W2PQL4 384 aaPredicted RBP16.13■□□□□ 0.17
PRKCD-201ENST00000330452 ETHE1O95571 254 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 LRG1P02750 347 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 GPX2P18283 190 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 POU3F2P20265 443 aaPredicted RBP16.13■□□□□ 0.17
PRKCD-201ENST00000330452 AQP1P29972 269 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 DNAJA1P31689 397 aaKnown RBP16.13■□□□□ 0.17
PRKCD-201ENST00000330452 PTGFRP43088 359 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 VEGFCP49767 419 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 VSX2P58304 361 aaPredicted RBP16.13■□□□□ 0.17
PRKCD-201ENST00000330452 TAS2R60P59551 318 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 BTG1P62324 171 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 TMEM88Q6PEY1 159 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 Q6ZVL8 140 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 HSD11B1LQ7Z5J1 315 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 TMEM25Q86YD3 366 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 ZFP82Q8N141 532 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 MED8Q96G25 268 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 SFXN2Q96NB2 322 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 COL21A1Q96P44 957 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 MCOLN1Q9GZU1 580 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 GABARAPL1Q9H0R8 117 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 LMAN2LQ9H0V9 348 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 ALX4Q9H161 411 aaPredicted RBP16.13■□□□□ 0.17
PRKCD-201ENST00000330452 LINC00597Q9H2U6 94 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 MTG2Q9H4K7 406 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 SEBOXQ9HB31 216 aaPredicted RBP16.13■□□□□ 0.17
PRKCD-201ENST00000330452 WBP1LQ9NX94 342 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 OBSL1O75147 1896 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 BRINP1O60477 761 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 STSP08842 583 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 LAG3P18627 525 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 LBX1P52954 281 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 KIAA1024LP59773 190 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 SLC7A9P82251 487 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 DOC2AQ14183 400 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 OPCMLQ14982 345 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.13■□□□□ 0.17
PRKCD-201ENST00000330452 PLEKHS1Q5SXH7 462 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 BICRALQ6AI39 1079 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 C3orf33Q6P1S2 294 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 DNAJC5GQ8N7S2 189 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 COQ8AQ8NI60 647 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 SORCS1Q8WY21 1168 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 MAL2Q969L2 176 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 PEX11GQ96HA9 241 aa16.13■□□□□ 0.17
PRKCD-201ENST00000330452 ARHGEF33A8MVX0 844 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 LZTS3O60299 673 aaPredicted RBP16.12■□□□□ 0.17
PRKCD-201ENST00000330452 SEMG1P04279 462 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 LINC00271P0C7V0 271 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 PRG2P13727 222 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 MUC1P15941 1255 aaPredicted RBP16.12■□□□□ 0.17
PRKCD-201ENST00000330452 EN2P19622 333 aaPredicted RBP16.12■□□□□ 0.17
PRKCD-201ENST00000330452 PVALBP20472 110 aaPredicted RBP16.12■□□□□ 0.17
PRKCD-201ENST00000330452 FPR1P21462 350 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 RORAP35398 523 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 CASP9P55211 416 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 SNRPEP62304 92 aaKnown RBP16.12■□□□□ 0.17
PRKCD-201ENST00000330452 SRSF11Q05519 484 aaKnown RBP16.12■□□□□ 0.17
PRKCD-201ENST00000330452 NAE1Q13564 534 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 BCL2L15Q5TBC7 163 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 THOC6Q86W42 341 aaKnown RBP16.12■□□□□ 0.17
PRKCD-201ENST00000330452 VRK1Q99986 396 aaPredicted RBP16.12■□□□□ 0.17
PRKCD-201ENST00000330452 TPT1P8Q9HAU6 139 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 ZNF451Q9Y4E5 1061 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 NOTCH4Q99466 2003 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 NPIPB8E9PQR5 432 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 CBR1P16152 277 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 VAMP1P23763 118 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 LAP3P28838 519 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 RNF144AP50876 292 aaPredicted RBP16.12■□□□□ 0.17
PRKCD-201ENST00000330452 ACSM2AQ08AH3 577 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 EXOC3L2Q2M3D2 409 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 ACSM2BQ68CK6 577 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 CBLL1Q75N03 491 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 SLC43A2Q8N370 569 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 Q8N402 240 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 DNAJC22Q8N4W6 341 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 KREMEN2Q8NCW0 462 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 ART5Q96L15 291 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 FCRL1Q96LA6 429 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 ERMAPQ96PL5 475 aaPredicted RBP16.12■□□□□ 0.17
PRKCD-201ENST00000330452 NT5DC2Q9H857 520 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 CHMP1AQ9HD42 196 aaPredicted RBP16.12■□□□□ 0.17
PRKCD-201ENST00000330452 GHRLQ9UBU3 117 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 SEC14L3Q9UDX4 400 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 ANKDD1BA6NHY2 528 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 PAICSP22234 425 aaKnown RBP16.12■□□□□ 0.17
PRKCD-201ENST00000330452 GPR143P51810 404 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 CRYBA2P53672 197 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 C21orf58P58505 322 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 SSX1Q16384 188 aa16.12■□□□□ 0.17
PRKCD-201ENST00000330452 MSANTD1Q6ZTZ1 278 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms