RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 ZNF597Q96LX8 424 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 RDH12Q96NR8 316 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 MS4A4EQ96PG1 132 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 NR1H4Q96RI1 486 aaPredicted RBP15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 BTBD2Q9BX70 525 aa15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 ZNF552Q9H707 407 aaPredicted RBP15.27■□□□□ 0.03
PDLIM1-201ENST00000329399 TTC36A6NLP5 189 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 HMGN4O00479 90 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 GNGT2O14610 69 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 DENRO43583 198 aaKnown RBP15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 ZNF682O95780 498 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 SEMG1P04279 462 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 FABP3P05413 133 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 SFTPCP11686 197 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 CRISP3P54108 245 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 RHAGQ02094 409 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 EPS8Q12929 822 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 SERTAD2Q14140 314 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 LRRC36Q1X8D7 754 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 MINDY4Q4G0A6 757 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 CYBRD1Q53TN4 286 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 ATAD3BQ5T9A4 648 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 ENPP6Q6UWR7 440 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 HIPK1Q86Z02 1210 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 ZDHHC21Q8IVQ6 265 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 HORMAD2Q8N7B1 307 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 TMEM52Q8NDY8 209 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 NFKBIDQ8NI38 313 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 BBS10Q8TAM1 723 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 TSLPQ969D9 159 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 FER1L6-AS2Q96M78 137 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 IP6K3Q96PC2 410 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 OR1F2PQ96R84 312 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 ZNF347Q96SE7 839 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 OSBPL11Q9BXB4 747 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 ACTRT3Q9BYD9 372 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 SEMA6AQ9H2E6 1030 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 TRIM45Q9H8W5 580 aaPredicted RBP15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 ZNF160Q9HCG1 818 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 EXD2Q9NVH0 621 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 C14orf105Q9NVL8 296 aa15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 PCDHGA9Q9Y5G4 932 aaKnown RBP15.26■□□□□ 0.03
PDLIM1-201ENST00000329399 LOC102723996A0A087X1L8 192 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 IGHV1-45A0A0A0MS14 117 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 A0A0G2JPF8 293 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 HNRNPCL2B2RXH8 293 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 HNRNPCL3B7ZW38 293 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 B4GALT2O60909 372 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 RASAL1O95294 804 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 HPRP00739 348 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 NUDT7P0C024 238 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 HNRNPCL4P0DMR1 293 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 ETS2P15036 469 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 RRADP55042 308 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 IGLV3-21P80748 117 aaPredicted RBP15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 FOLH1Q04609 750 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 MED21Q13503 144 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 PCOLCEQ15113 449 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 IFI44LQ53G44 452 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 SFT2D3Q587I9 215 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 MFSD4BQ5TF39 518 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 ZDHHC13Q8IUH4 622 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 CLEC4FQ8N1N0 589 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 SLC38A5Q8WUX1 472 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 UCN3Q969E3 161 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 NACC2Q96BF6 587 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 WDR77Q9BQA1 342 aaPredicted RBP15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 OR51I1Q9H343 314 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 COQ10BQ9H8M1 238 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 ATP13A2Q9NQ11 1180 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 DDX18Q9NVP1 670 aaKnown RBP15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 C19orf53Q9UNZ5 99 aaPredicted RBP15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 MMACHCQ9Y4U1 282 aa15.25■□□□□ 0.03
PDLIM1-201ENST00000329399 WASHC1A8K0Z3 465 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 M0QX08 132 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 TPST1O60507 370 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 COQ9O75208 318 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 PRKRAO75569 313 aaKnown RBP15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 PGM3O95394 542 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 AK1P00568 194 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 IGHEP01854 428 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 HMGN2P05204 90 aaKnown RBP15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 AQP4P55087 323 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 SOX8P57073 446 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 MAP4K2Q12851 820 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 NADK2Q4G0N4 442 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 CDC73Q6P1J9 531 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 TMEM107Q6UX40 140 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 ANKRD37Q7Z713 158 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 KBTBD2Q8IY47 623 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 ST13P4Q8IZP2 240 aaPredicted RBP15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 CLEC1AQ8NC01 280 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 OR9A2Q8NGT5 310 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 OR5K1Q8NHB7 308 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 GEMIN6Q8WXD5 167 aaKnown RBP15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 PSMF1Q92530 271 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 MAL2Q969L2 176 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 HSH2DQ96JZ2 352 aa15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 TRNT1Q96Q11 434 aaKnown RBP15.24■□□□□ 0.03
PDLIM1-201ENST00000329399 CSF3RQ99062 836 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms