RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 HSH2DQ96JZ2 352 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 C2orf42Q9NWW7 574 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 TAS2R13Q9NYV9 303 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 PCDHB10Q9UN67 800 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 PCDHB9Q9Y5E1 797 aa11.16□□□□□ -0.62
SHMT2-201ENST00000328923 DPM1O60762 260 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 ENTPD6O75354 484 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 LATS1O95835 1130 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 SEMG1P04279 462 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 USP17L7P0C7H9 530 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 ATXN1LP0C7T5 689 aaKnown RBP11.15□□□□□ -0.62
SHMT2-201ENST00000328923 ADRB3P13945 408 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 ABCD3P28288 659 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 RENBPP51606 427 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 MAD2L1Q13257 205 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-201ENST00000328923 EIF4EBP2Q13542 120 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-201ENST00000328923 PTGR1Q14914 329 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 ATP13A5Q4VNC0 1218 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 XKR4Q5GH76 650 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 GPRC6AQ5T6X5 926 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 TCEAL6Q6IPX3 200 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 RPL13AP3Q6NVV1 102 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 H3F3CQ6NXT2 135 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 CASP12Q6UXS9 341 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 MBOAT1Q6ZNC8 495 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 PTCHD4Q6ZW05 846 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 TMIEQ8NEW7 156 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 OR9A2Q8NGT5 310 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 FAM193BQ96PV7 902 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-201ENST00000328923 SMOQ99835 787 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 SUCNR1Q9BXA5 334 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 DUSP15Q9H1R2 295 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-201ENST00000328923 SLC25A32Q9H2D1 315 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 PRDM13Q9H4Q3 707 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 TCF7L1Q9HCS4 588 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 DZANK1Q9NVP4 752 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 CLN6Q9NWW5 311 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 RPS6KB2Q9UBS0 482 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 FLVCR2Q9UPI3 526 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-201ENST00000328923 OR51F1A6NGY5 319 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 NCF1BA6NI72 391 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-201ENST00000328923 NCF1CA8MVU1 366 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-201ENST00000328923 RFXAPO00287 272 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 MID1O15344 667 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 RPP40O75818 363 aaKnown RBP11.15□□□□□ -0.62
SHMT2-201ENST00000328923 C1QCP02747 245 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 C6P13671 934 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 PTPN6P29350 595 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 CCR1P32246 355 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 CCR7P32248 378 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 PSEN2P49810 448 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 BEX3Q00994 111 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 IL10RBQ08334 325 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 PEA15Q15121 130 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 ALG11Q2TAA5 492 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 SLC36A2Q495M3 483 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 CDNFQ49AH0 187 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 SPANXN4Q5MJ08 99 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 LIPJQ5W064 366 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 OVOS1Q6IE37 1185 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 GPRIN1Q7Z2K8 1008 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 ZNF551Q7Z340 670 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-201ENST00000328923 GPR135Q8IZ08 494 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 RNF113BQ8IZP6 322 aaKnown RBP11.15□□□□□ -0.62
SHMT2-201ENST00000328923 HDDC3Q8N4P3 179 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 ZSCAN1Q8NBB4 408 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 WFIKKN2Q8TEU8 576 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 DNAJB3Q8WWF6 145 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 IL4I1Q96RQ9 567 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 XKR8Q9H6D3 395 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 RNF122Q9H9V4 155 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 ASIC5Q9NY37 505 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 MBD1Q9UIS9 605 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-201ENST00000328923 POFUT2Q9Y2G5 429 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 SNX11Q9Y5W9 270 aa11.15□□□□□ -0.62
SHMT2-201ENST00000328923 SPIN1Q9Y657 262 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-201ENST00000328923 SMIM28A0A1B0GU29 152 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 A0A1B0GW55 424 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 AGAP14A8MT82 685 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 WNT9AO14904 365 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 IGHA2P01877 340 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 DUX4L2P0CJ85 424 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 DUX4L3P0CJ86 424 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 DUX4L4P0CJ87 422 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 DUX4L5P0CJ88 424 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 DUX4L6P0CJ89 424 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 DUX4L7P0CJ90 424 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 ODC1P11926 461 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 UGT2B7P16662 529 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 TMEM11P17152 192 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 UQCRC2P22695 453 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 DDTP30046 118 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 CDKN2CP42773 168 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 LILRA4P59901 499 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 MINDY4Q4G0A6 757 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 SIRPB2Q5JXA9 342 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 THEM4Q5T1C6 240 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 NCMAPQ5T1S8 102 aa11.14□□□□□ -0.63
SHMT2-201ENST00000328923 LRIF1Q5T3J3 769 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms