RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 BAK1Q16611 211 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 FLYWCH1Q4VC44 716 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF613Q6PF04 617 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 DPPA4Q7L190 304 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 RAB11FIP2Q7L804 512 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 SLC35F3Q8IY50 421 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 SMARCD2Q92925 531 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 ADAD1Q96M93 576 aaKnown RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 PRAP1Q96NZ9 151 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 WACQ9BTA9 647 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 TMEM121BQ9BXQ6 578 aaPredicted RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 GHRLQ9UBU3 117 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 B4GALT7Q9UBV7 327 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 NRXN2Q9P2S2 1712 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 LTBP4Q8N2S1 1624 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 SNRPGP15A8MWD9 76 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 C8AP07357 584 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 AZGP1P25311 298 aaKnown RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 ADRA1AP35348 466 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 TAS2R20P59543 309 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 RAB8AP61006 207 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 TOMM20Q15388 145 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 CMTM1Q8IZ96 169 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 PELI3Q8N2H9 469 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 SPATA6LQ8N4H0 392 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF615Q8N8J6 731 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 RGCCQ9H4X1 137 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 SERTAD3Q9UJW9 196 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 TRBV2A0A0J9YWF9 115 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 CXCL14O95715 111 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 SPARCP09486 303 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 AGXTP21549 392 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 CCND3P30281 292 aaPredicted RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 SLC15A4Q8N697 577 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 BRIX1Q8TDN6 353 aaKnown RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 IRF7Q92985 503 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 SGTBQ96EQ0 304 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 SLC22A12Q96S37 553 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 MCHR1Q99705 422 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 RSPH9Q9H1X1 276 aaPredicted RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 NDUFAF4Q9P032 175 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 INSL5Q9Y5Q6 135 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 CDH15P55291 814 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 XKR7Q5GH72 579 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 FAM156AQ8NDB6 213 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 OR7G3Q8NG95 312 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 MZB1Q8WU39 189 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 EDAQ92838 391 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 UTP4Q969X6 686 aaKnown RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 EBPLQ9BY08 206 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 MUTYHQ9UIF7 546 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 KIR2DS5A0A0G2JLQ3 304 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 A0A0G2JNG1 304 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 KIR2DS3K7RE56 304 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 KLK1P06870 262 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 NFYAP23511 347 aaPredicted RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 CPT2P23786 658 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 PRLHRP49683 370 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 PCBD1P61457 104 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 KIR2DS5Q14953 304 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 CAMKMTQ7Z624 323 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 ASPGQ86U10 573 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 TCTE3Q8IZS6 198 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 CD200R1Q8TD46 325 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 SLC7A6Q92536 515 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 OR2M4Q96R27 311 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 SLC38A3Q99624 504 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 SLC38A1Q9H2H9 487 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 DIMT1Q9UNQ2 313 aaKnown RBP8.36□□□□□ -1.07
COL6A5-202ENST00000312481 RNF24Q9Y225 148 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 CACNA1EQ15878 2313 aa8.36□□□□□ -1.07
COL6A5-202ENST00000312481 NPIPA5A0A0B4J1W7 369 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 CACNG3O60359 315 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TSPAN31Q12999 210 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 RGNQ15493 299 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 DND1Q8IYX4 353 aaKnown RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 KREMEN2Q8NCW0 462 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 HUS1BQ8NHY5 278 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 LRRN4Q8WUT4 740 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 SPTSSAQ969W0 71 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 KCNS3Q9BQ31 491 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 HS3ST2Q9Y278 367 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TFAP2AP05549 437 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 PIRTP0C851 137 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 KCNJ5P48544 419 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 CD81P60033 236 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 GRK1Q15835 563 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TMEM244Q5VVB8 128 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 PRAMEF18Q5VWM3 479 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 LIPKQ5VXJ0 399 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 NXNL2Q5VZ03 156 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TTLL10Q6ZVT0 673 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 HIST2H3AQ71DI3 136 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 FUNDC1Q8IVP5 155 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 TMEM156Q8N614 296 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 CHST4Q8NCG5 386 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 OR9I1Q8NGQ6 314 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 HERVK_113Q902F9 699 aa8.35□□□□□ -1.07
COL6A5-202ENST00000312481 ELL3Q9HB65 397 aaPredicted RBP8.35□□□□□ -1.07
COL6A5-202ENST00000312481 FAM212BQ9NTI7 297 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms