RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 C6orf141Q5SZD1 244 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 MFSD4BQ5TF39 518 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 ARHGAP40Q5TG30 622 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 C1orf189Q5VU69 101 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 ZNF770Q6IQ21 691 aaPredicted RBP15.54■□□□□ 0.08
CLCF1-201ENST00000312438 FIGNL1Q6PIW4 674 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 LINC00471Q8N535 108 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 AQP11Q8NBQ7 271 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 HDAC2Q92769 488 aaKnown RBP15.54■□□□□ 0.08
CLCF1-201ENST00000312438 CCDC74BQ96LY2 380 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 OR6C1Q96RD1 312 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 FAM192AQ9GZU8 254 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 MKKSQ9NPJ1 570 aaPredicted RBP15.54■□□□□ 0.08
CLCF1-201ENST00000312438 FBXO34Q9NWN3 711 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 PRODH2Q9UF12 536 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 RARRES3Q9UL19 164 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 ERVK-19Q9WJR5 959 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 GPR55Q9Y2T6 319 aaPredicted RBP15.54■□□□□ 0.08
CLCF1-201ENST00000312438 USP34Q70CQ2 3546 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 IGKV3D-11A0A0A0MRZ8 115 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 C17orf105B2RV13 164 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 KHNYNO15037 678 aaKnown RBP15.54■□□□□ 0.08
CLCF1-201ENST00000312438 KIAA0513O60268 411 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 RPS4Y1P22090 263 aaKnown RBP15.54■□□□□ 0.08
CLCF1-201ENST00000312438 MPLP40238 635 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 CD47Q08722 323 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 MEP1AQ16819 746 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 LIN52Q52LA3 116 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 TMEM151BQ8IW70 566 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 PARP8Q8N3A8 854 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 ZNF615Q8N8J6 731 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 PTPMT1Q8WUK0 201 aaPredicted RBP15.54■□□□□ 0.08
CLCF1-201ENST00000312438 FBLIM1Q8WUP2 373 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 SENP5Q96HI0 755 aaPredicted RBP15.54■□□□□ 0.08
CLCF1-201ENST00000312438 HRASLS5Q96KN8 279 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 GFM1Q96RP9 751 aaKnown RBP15.54■□□□□ 0.08
CLCF1-201ENST00000312438 FUZQ9BT04 418 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 ARRDC1-AS1Q9H2J1 176 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 ARMC7Q9H6L4 198 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 PNO1Q9NRX1 252 aaKnown RBP15.54■□□□□ 0.08
CLCF1-201ENST00000312438 MGAT4BQ9UQ53 548 aa15.54■□□□□ 0.08
CLCF1-201ENST00000312438 ARID1BQ8NFD5 2236 aaPredicted RBP15.54■□□□□ 0.08
CLCF1-201ENST00000312438 TP53BP1Q12888 1972 aaPredicted RBP15.53■□□□□ 0.08
CLCF1-201ENST00000312438 AP3D1O14617 1153 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 ADAP00813 363 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 CCNYL3P0C7X3 344 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 NID1P14543 1247 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 EPHA2P29317 976 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 TRHRP34981 398 aaPredicted RBP15.53■□□□□ 0.08
CLCF1-201ENST00000312438 EEF1A1P68104 462 aaKnown RBP15.53■□□□□ 0.08
CLCF1-201ENST00000312438 IL5RAQ01344 420 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 TOP3AQ13472 1001 aaPredicted RBP15.53■□□□□ 0.08
CLCF1-201ENST00000312438 SEC23BQ15437 767 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 VWA2Q5GFL6 755 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 RNF220Q5VTB9 566 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 ZNF836Q6ZNA1 936 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 C16orf52Q8NHV5 167 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 SLC7A13Q8TCU3 470 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 PITX2Q99697 317 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 Q9N2J8 555 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 NDUFA13Q9P0J0 144 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 PCDHGA5Q9Y5G8 931 aa15.53■□□□□ 0.08
CLCF1-201ENST00000312438 SH3PXD2BA1X283 911 aa15.52■□□□□ 0.08
CLCF1-201ENST00000312438 OR10H3O60404 316 aa15.52■□□□□ 0.08
CLCF1-201ENST00000312438 TPST2O60704 377 aa15.52■□□□□ 0.08
CLCF1-201ENST00000312438 ZNF883P0CG24 379 aa15.52■□□□□ 0.08
CLCF1-201ENST00000312438 POU2F1P14859 743 aa15.52■□□□□ 0.08
CLCF1-201ENST00000312438 CDH15P55291 814 aa15.52■□□□□ 0.08
CLCF1-201ENST00000312438 RGS8P57771 180 aaPredicted RBP15.52■□□□□ 0.08
CLCF1-201ENST00000312438 TAS2R41P59536 307 aa15.52■□□□□ 0.08
CLCF1-201ENST00000312438 RHAGQ02094 409 aa15.52■□□□□ 0.08
CLCF1-201ENST00000312438 ST3GAL3Q11203 375 aa15.52■□□□□ 0.08
CLCF1-201ENST00000312438 CDK5R2Q13319 367 aa15.52■□□□□ 0.08
CLCF1-201ENST00000312438 MAPK14Q16539 360 aa15.52■□□□□ 0.08
CLCF1-201ENST00000312438 PODNL1Q6PEZ8 512 aa15.52■□□□□ 0.08
CLCF1-201ENST00000312438 BPHLQ86WA6 291 aaPredicted RBP15.52■□□□□ 0.08
CLCF1-201ENST00000312438 GTPBP3Q969Y2 492 aaKnown RBP15.52■□□□□ 0.08
CLCF1-201ENST00000312438 ADNPQ9H2P0 1102 aa15.52■□□□□ 0.08
CLCF1-201ENST00000312438 SMOC1Q9H4F8 434 aa15.52■□□□□ 0.08
CLCF1-201ENST00000312438 CLCA3PQ9Y6N3 262 aa15.52■□□□□ 0.08
CLCF1-201ENST00000312438 TCRBV16S1A1N1A0A5B0 115 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 SYNDIG1LA6NDD5 238 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 TRIM64CA6NLI5 447 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 NTN3O00634 580 aaPredicted RBP15.52■□□□□ 0.07
CLCF1-201ENST00000312438 FRS3O43559 492 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 CYP7B1O75881 506 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 LINGO3P0C6S8 592 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 HLCSP50747 726 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 NSDHLQ15738 373 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 CTU2Q2VPK5 515 aaKnown RBP15.52■□□□□ 0.07
CLCF1-201ENST00000312438 FLYWCH1Q4VC44 716 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 ZC3H14Q6PJT7 736 aaKnown RBP15.52■□□□□ 0.07
CLCF1-201ENST00000312438 DBX2Q6ZNG2 339 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 ADAMTS16Q8TE57 1224 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 TSLPQ969D9 159 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 G6PC3Q9BUM1 346 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 TGIF2Q9GZN2 237 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 EVA1AQ9H8M9 152 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 KCNE5Q9UJ90 142 aa15.52■□□□□ 0.07
CLCF1-201ENST00000312438 DTX4Q9Y2E6 619 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms