RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 SMURF1Q9HCE7 757 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 FGF20Q9NP95 211 aaPredicted RBP13.29□□□□□ -0.28
RAB40A-201ENST00000304236 QPCTLQ9NXS2 382 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 APOBEC3BQ9UH17 382 aaKnown RBP13.29□□□□□ -0.28
RAB40A-201ENST00000304236 CACNA1AO00555 2505 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.29□□□□□ -0.28
RAB40A-201ENST00000304236 ISM1B1AKI9 464 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 PRODHO43272 600 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 TPST2O60704 377 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 DNTTP04053 509 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 ACP2P11117 423 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 GTF2E2P29084 291 aaKnown RBP13.29□□□□□ -0.28
RAB40A-201ENST00000304236 PRKAR1BP31321 381 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 RUNX1T1Q06455 604 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 SLC27A4Q6P1M0 643 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 RASSF6Q6ZTQ3 369 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 USP30Q70CQ3 517 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 RRM2BQ7LG56 351 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 FAM20CQ8IXL6 584 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 TXNDC15Q96J42 360 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 OR2M4Q96R27 311 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 MACROD1Q9BQ69 325 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 SLC38A1Q9H2H9 487 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 SPHK1Q9NYA1 384 aa13.29□□□□□ -0.28
RAB40A-201ENST00000304236 MDC1Q14676 2089 aaKnown RBP13.28□□□□□ -0.28
RAB40A-201ENST00000304236 A0A087WUU8 490 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 TMEM129A0AVI4 362 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 DCDC2BA2VCK2 349 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 SLC30A4O14863 429 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 APBB3O95704 486 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 STATHP02808 62 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 CHRM5P08912 532 aaPredicted RBP13.28□□□□□ -0.28
RAB40A-201ENST00000304236 HBQ1P09105 142 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 C8orf89P0DMQ9 161 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 NR2F6P10588 404 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 ALPPL2P10696 532 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 CPEP16870 476 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 RPS19P39019 145 aaKnown RBP13.28□□□□□ -0.28
RAB40A-201ENST00000304236 SOX3P41225 446 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 TMED10P49755 219 aaKnown RBP13.28□□□□□ -0.28
RAB40A-201ENST00000304236 RAB8AP61006 207 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 BNC1Q01954 994 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 DUSP2Q05923 314 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 ZNF750Q32MQ0 723 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 SDE2Q6IQ49 451 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 C16orf62Q7Z3J2 963 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 WDR53Q7Z5U6 358 aaPredicted RBP13.28□□□□□ -0.28
RAB40A-201ENST00000304236 AMIGO1Q86WK6 493 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 PAQR7Q86WK9 346 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 PHC2Q8IXK0 858 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 TOR1AIP2Q8NFQ8 470 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 PIGXQ8TBF5 258 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 NT5CQ8TCD5 201 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 HTRA1Q92743 480 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 SLC22A18Q96BI1 424 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 KCNS3Q9BQ31 491 aa13.28□□□□□ -0.28
RAB40A-201ENST00000304236 CACYBPQ9HB71 228 aaKnown RBP13.28□□□□□ -0.28
RAB40A-201ENST00000304236 EXOSC1Q9Y3B2 195 aaKnown RBP13.28□□□□□ -0.28
RAB40A-201ENST00000304236 CTDSP2O14595 271 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 ATP6V1G1O75348 118 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 UBXN7O94888 489 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 CCNYL3P0C7X3 344 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 TNFSF8P32971 234 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 MC3RP41968 323 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 STAT5AP42229 794 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 KIR2DL1P43626 348 aaPredicted RBP13.27□□□□□ -0.28
RAB40A-201ENST00000304236 KIAA1024LP59773 190 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 BTN3A2P78410 334 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 CHRNEQ04844 493 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 DOC2BQ14184 412 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 MINDY4Q4G0A6 757 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 ZNF730Q6ZMV8 503 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 OLIG3Q7RTU3 272 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 BCDIN3DQ7Z5W3 292 aaKnown RBP13.27□□□□□ -0.28
RAB40A-201ENST00000304236 KIF18BQ86Y91 864 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 OR9A2Q8NGT5 310 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 SETD6Q8TBK2 473 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 ADAMTS15Q8TE58 950 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 CHAC2Q8WUX2 184 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 LCN9Q8WX39 176 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 OTUB1Q96FW1 271 aaPredicted RBP13.27□□□□□ -0.28
RAB40A-201ENST00000304236 WDFY2Q96P53 400 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 GPA33Q99795 319 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 SAP130Q9H0E3 1048 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 KLHL25Q9H0H3 589 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 ARRDC1-AS1Q9H2J1 176 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 PRDM9Q9NQV7 894 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 NTMQ9P121 344 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 PHF11Q9UIL8 331 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 KCNE3Q9Y6H6 103 aa13.27□□□□□ -0.28
RAB40A-201ENST00000304236 DCHS1Q96JQ0 3298 aa13.27□□□□□ -0.29
RAB40A-201ENST00000304236 WDR87Q6ZQQ6 2873 aa13.27□□□□□ -0.29
RAB40A-201ENST00000304236 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.27□□□□□ -0.29
RAB40A-201ENST00000304236 TBC1D3DA0A087WVF3 549 aa13.27□□□□□ -0.29
RAB40A-201ENST00000304236 TBC1D3IA0A087WXS9 549 aa13.27□□□□□ -0.29
RAB40A-201ENST00000304236 TBC1D3EA0A087X179 549 aa13.27□□□□□ -0.29
RAB40A-201ENST00000304236 TBC1D3KA0A087X1G2 549 aa13.27□□□□□ -0.29
RAB40A-201ENST00000304236 IQCMA0A1B0GVH7 501 aa13.27□□□□□ -0.29
RAB40A-201ENST00000304236 SLC35F4A4IF30 521 aa13.27□□□□□ -0.29
RAB40A-201ENST00000304236 TBC1D3FA6NER0 549 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms