RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 SIRT4Q9Y6E7 314 aaPredicted RBP13.57□□□□□ -0.24
CDT1-201ENST00000301019 C7orf66A4D0T2 115 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 SUSD5O60279 629 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 HLA-DQB1P01920 261 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 LIMS3P0CW19 117 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 LIMS4P0CW20 117 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 PRPS2P11908 318 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 HOXB8P17481 243 aaPredicted RBP13.56□□□□□ -0.24
CDT1-201ENST00000301019 HOXB9P17482 250 aaPredicted RBP13.56□□□□□ -0.24
CDT1-201ENST00000301019 BMP8BP34820 402 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 PTSQ03393 145 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 BAMBIQ13145 260 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 GRB14Q14449 540 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 C2orf68Q2NKX9 166 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 OVCH2Q7RTZ1 564 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 BMP8AQ7Z5Y6 402 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.56□□□□□ -0.24
CDT1-201ENST00000301019 DDX53Q86TM3 631 aaKnown RBP13.56□□□□□ -0.24
CDT1-201ENST00000301019 HS6ST3Q8IZP7 471 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 C12orf45Q8N5I9 185 aaPredicted RBP13.56□□□□□ -0.24
CDT1-201ENST00000301019 TTC9BQ8N6N2 239 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 GPR26Q8NDV2 337 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 KIAA1143Q96AT1 154 aaPredicted RBP13.56□□□□□ -0.24
CDT1-201ENST00000301019 TBC1D20Q96BZ9 403 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 PPP1R16AQ96I34 528 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 YIPF4Q9BSR8 244 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 KLK11Q9UBX7 282 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 KIF25Q9UIL4 384 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 CRLS1Q9UJA2 301 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 ASF1AQ9Y294 204 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 C5orf58C9J3I9 102 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 S100A9P06702 114 aaKnown RBP13.56□□□□□ -0.24
CDT1-201ENST00000301019 XCR1P46094 333 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 MTNR1AP48039 350 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 RPE65Q16518 533 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 UBE2R2Q712K3 238 aaPredicted RBP13.56□□□□□ -0.24
CDT1-201ENST00000301019 KLHDC8BQ8IXV7 354 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 FCRL1Q96LA6 429 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 SAMD11Q96NU1 681 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 GAL3ST1Q99999 423 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 WDR26Q9H7D7 661 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 SLC6A5Q9Y345 797 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 A0A1B0GVI7 797 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 METTL21EPA6NDL7 271 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 MEIS3P1A6NDR6 274 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 TRABD2BA6NFA1 517 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 LRRC72A6NJI9 287 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 CHST10O43529 356 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 MPZL2O60487 215 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 CRYBA1P05813 215 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 ANXA5P08758 320 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 PNPLA4P41247 253 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 ALDH9A1P49189 494 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 TAF1AQ15573 450 aaPredicted RBP13.56□□□□□ -0.24
CDT1-201ENST00000301019 MANEALQ5VSG8 457 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 TMUB2Q71RG4 321 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 PUSL1Q8N0Z8 303 aaKnown RBP13.56□□□□□ -0.24
CDT1-201ENST00000301019 PHOSPHO1Q8TCT1 267 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 KLK6Q92876 244 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 EMC3Q9P0I2 261 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 NUBP2Q9Y5Y2 271 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 ENPP4Q9Y6X5 453 aa13.56□□□□□ -0.24
CDT1-201ENST00000301019 LRRC37A2A6NM11 1700 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 SELENOFO60613 162 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 GABRA5P31644 462 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 STARP49675 285 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 UBE2IP63279 158 aaKnown RBP13.55□□□□□ -0.24
CDT1-201ENST00000301019 ACVR1Q04771 509 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 RAB41Q5JT25 222 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 NDUFAF7Q7L592 441 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 OR4D11Q8NGI4 311 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 GEMIN6Q8WXD5 167 aaKnown RBP13.55□□□□□ -0.24
CDT1-201ENST00000301019 SOSTQ9BQB4 213 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 RSRP1Q9BUV0 290 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 MCRIP1C9JLW8 97 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 RASGRP1O95267 797 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 FGF2P09038 288 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 APEHP13798 732 aaKnown RBP13.55□□□□□ -0.24
CDT1-201ENST00000301019 MAGEB1P43366 347 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 VEZF1Q14119 521 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 GSG1LQ6UXU4 331 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 TOP6BLQ8N6T0 577 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 ZNF671Q8TAW3 534 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 ABCC13Q9NSE7 274 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 BABAM2Q9NXR7 383 aa13.55□□□□□ -0.24
CDT1-201ENST00000301019 ANKRD66B4E2M5 251 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 REM1O75628 298 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 TGFB1P01137 390 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 HLA-DPB1P04440 258 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 ALPPL2P10696 532 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 ZNF35P13682 527 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 S100A11P31949 105 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 SORDQ00796 357 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 ZNF33AQ06730 810 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 SERINC3Q13530 473 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 CHRNA6Q15825 494 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 HECTD3Q5T447 861 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 FCRLBQ6BAA4 426 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 SEZ6L2Q6UXD5 910 aa13.54□□□□□ -0.24
CDT1-201ENST00000301019 RFLNAQ6ZTI6 216 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms