RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 IRAK3Q9Y616 596 aa17.98■□□□□ 0.47
LSM12-201ENST00000293406 A0A0G2JMP0 313 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 SLC9A3R1O14745 358 aaPredicted RBP17.97■□□□□ 0.47
LSM12-201ENST00000293406 GNRH1P01148 92 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 IGHA1P01876 353 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 TRHRP34981 398 aaPredicted RBP17.97■□□□□ 0.47
LSM12-201ENST00000293406 STAT5AP42229 794 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 CSTF1Q05048 431 aaKnown RBP17.97■□□□□ 0.47
LSM12-201ENST00000293406 MESP2Q0VG99 397 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 CCDC85BQ15834 202 aaPredicted RBP17.97■□□□□ 0.47
LSM12-201ENST00000293406 SLC39A5Q6ZMH5 540 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 BBS1Q8NFJ9 593 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 CXorf40AQ8TE69 158 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 SNAPC3Q92966 411 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 CNRIP1Q96F85 164 aaPredicted RBP17.97■□□□□ 0.47
LSM12-201ENST00000293406 OR7D2Q96RA2 312 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 GTPBP2Q9BX10 602 aaKnown RBP17.97■□□□□ 0.47
LSM12-201ENST00000293406 SLC38A1Q9H2H9 487 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 EQTNQ9NQ60 294 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 ASB4Q9Y574 426 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 PRRT4C9JH25 899 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 INMT-MINDY4F8WBC2 141 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 OR2B3O76000 313 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 SLC35G4P0C7Q5 338 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 C8orf89P0DMQ9 161 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 FPR3P25089 353 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 HTR1FP30939 366 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 GPR4P46093 362 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 CLCNKAP51800 687 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 DUSP2Q05923 314 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 TGM3Q08188 693 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 MAB21L1Q13394 359 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 HNRNPA1L2Q32P51 320 aaKnown RBP17.97■□□□□ 0.47
LSM12-201ENST00000293406 TMEM52BQ4KMG9 183 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 EOGTQ5NDL2 527 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 VASNQ6EMK4 673 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 LYPD8Q6UX82 237 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 TRILQ7L0X0 811 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 OR8K5Q8NH50 307 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 MACROD1Q9BQ69 325 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 ANKRD19PQ9H560 264 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 MED17Q9NVC6 651 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 IL20Q9NYY1 176 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 H2AFY2Q9P0M6 372 aaPredicted RBP17.97■□□□□ 0.47
LSM12-201ENST00000293406 ENTPD4Q9Y227 616 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.97■□□□□ 0.47
LSM12-201ENST00000293406 CDH10Q9Y6N8 788 aa17.97■□□□□ 0.47
LSM12-201ENST00000293406 IGKV1-8A0A0C4DH67 115 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 A0A1W2PR48 441 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 AKR7A2O43488 359 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 ELK1P19419 428 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 SNRPD2P62316 118 aaKnown RBP17.96■□□□□ 0.47
LSM12-201ENST00000293406 PRR5P85299 388 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 PGGHGQ32M88 737 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 TMEM35AQ53FP2 167 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 ZNF322Q6U7Q0 402 aaPredicted RBP17.96■□□□□ 0.47
LSM12-201ENST00000293406 TMEM91Q6ZNR0 172 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 NKAIN4Q8IVV8 208 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 ACOT11Q8WXI4 607 aaPredicted RBP17.96■□□□□ 0.47
LSM12-201ENST00000293406 ACOT12Q8WYK0 555 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 MOAP1Q96BY2 351 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 TRAF4Q9BUZ4 470 aaPredicted RBP17.96■□□□□ 0.47
LSM12-201ENST00000293406 TRMT61BQ9BVS5 477 aaKnown RBP17.96■□□□□ 0.47
LSM12-201ENST00000293406 HDHD2Q9H0R4 259 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 GALNT9Q9HCQ5 603 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 TNFRSF10DQ9UBN6 386 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 EXTL2Q9UBQ6 330 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 IL20RAQ9UHF4 553 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 PHF11Q9UIL8 331 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 TMA7Q9Y2S6 64 aaKnown RBP17.96■□□□□ 0.47
LSM12-201ENST00000293406 ATG4BQ9Y4P1 393 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 CSNK1G3Q9Y6M4 447 aa17.96■□□□□ 0.47
LSM12-201ENST00000293406 EDDM13A0A1B0GTR0 161 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 SMLR1H3BR10 107 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 ERI3O43414 337 aaKnown RBP17.95■□□□□ 0.46
LSM12-201ENST00000293406 PCCBP05166 539 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 ARPC4P59998 168 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 PRDX1Q06830 199 aaKnown RBP17.95■□□□□ 0.46
LSM12-201ENST00000293406 MRPL28Q13084 256 aaKnown RBP17.95■□□□□ 0.46
LSM12-201ENST00000293406 ELAVL3Q14576 367 aaKnown RBP17.95■□□□□ 0.46
LSM12-201ENST00000293406 ADAMTSL4Q6UY14 1074 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 RAB42Q8N4Z0 105 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 TTLQ8NG68 377 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 CREB3L1Q96BA8 519 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 LGR4Q9BXB1 951 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 KLHL28Q9NXS3 571 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 PTGFRNQ9P2B2 879 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 CBLCQ9ULV8 474 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 A0A0X1KG70 313 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 HIDE1A8MVS5 230 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 SLC2A10O95528 541 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 RAB25P57735 213 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 DECR1Q16698 335 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 IDNKQ5T6J7 187 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 B3GLCTQ6Y288 498 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 PLEKHM3Q6ZWE6 761 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 NRMQ8IXM6 262 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 OR4M2Q8NGB6 313 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 ING5Q8WYH8 240 aa17.95■□□□□ 0.46
LSM12-201ENST00000293406 AKAP1Q92667 903 aaKnown RBP eCLIP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms