RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 GDF9O60383 454 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 CSF2P04141 144 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 CFIP05156 583 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 CLEC2LP0C7M8 214 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 TBC1D3HP0C7X1 549 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 ADRB3P13945 408 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 PER3P56645 1201 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 DAB2P98082 770 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 PUM1Q14671 1186 aaKnown RBP eCLIP9.7□□□□□ -0.86
UPF3B-201ENST00000276201 COL28A1Q2UY09 1125 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.7□□□□□ -0.86
UPF3B-201ENST00000276201 TBC1D3GQ6DHY5 549 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 TBC1D3CQ6IPX1 549 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 PGBD2Q6P3X8 592 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 CNIH2Q6PI25 160 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 SLC23A3Q6PIS1 610 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 CRTC1Q6UUV9 634 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 GLRX5Q86SX6 157 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 TBC1D3Q8IZP1 549 aaPredicted RBP9.7□□□□□ -0.86
UPF3B-201ENST00000276201 ZNF485Q8NCK3 441 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 ATP6V1C2Q8NEY4 427 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 CEP76Q8TAP6 659 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 UFD1Q92890 307 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 UPRTQ96BW1 309 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 MAP6Q96JE9 813 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 PRR14Q9BWN1 585 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 JAM3Q9BX67 310 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 CPEB1Q9BZB8 566 aaKnown RBP9.7□□□□□ -0.86
UPF3B-201ENST00000276201 FSCN3Q9NQT6 498 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 ZNF275Q9NSD4 429 aaPredicted RBP9.7□□□□□ -0.86
UPF3B-201ENST00000276201 ASB6Q9NWX5 421 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 GLTPQ9NZD2 209 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 SUSD2Q9UGT4 822 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 SPEF1Q9Y4P9 236 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 PCDH15Q96QU1 1955 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 DMXL1Q9Y485 3027 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 CACNA1EQ15878 2313 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 A0A1W2PQ67 120 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 INMT-MINDY4F8WBC2 141 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 SPINT1O43278 529 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 LATO43561 262 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 C6orf47O95873 294 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 TPOP07202 933 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 H1F0P07305 194 aaKnown RBP9.7□□□□□ -0.86
UPF3B-201ENST00000276201 ACP2P11117 423 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 CD27P26842 260 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 LIM2P55344 173 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 DSTNP60981 165 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 CDK5Q00535 292 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 TMEM44Q2T9K0 475 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 FLYWCH1Q4VC44 716 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 SYT14P1Q58G82 188 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 TOR2AQ5JU69 321 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 C22orf42Q6IC83 251 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 PAMR1Q6UXH9 720 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 RABEPKQ7Z6M1 372 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 AMIGO1Q86WK6 493 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 GPALPP1Q8IXQ4 340 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 FBXO15Q8NCQ5 510 aaPredicted RBP9.7□□□□□ -0.86
UPF3B-201ENST00000276201 OR7G3Q8NG95 312 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 ECHDC3Q96DC8 303 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 SCRN2Q96FV2 425 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 ZNF582Q96NG8 517 aaPredicted RBP9.7□□□□□ -0.86
UPF3B-201ENST00000276201 CITED4Q96RK1 184 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 IL4I1Q96RQ9 567 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 ATF6BQ99941 703 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 POLR2J3Q9H1A7 115 aaKnown RBP9.7□□□□□ -0.86
UPF3B-201ENST00000276201 KLF15Q9UIH9 416 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 ING4Q9UNL4 249 aa9.7□□□□□ -0.86
UPF3B-201ENST00000276201 A0A1W2PPC4 97 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 TSPAN11A1L157 253 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 WWP2O00308 870 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 BCAT2O15382 392 aaPredicted RBP9.69□□□□□ -0.86
UPF3B-201ENST00000276201 AKR7A2O43488 359 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 SH3BP5O60239 455 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 RNGTTO60942 597 aaKnown RBP9.69□□□□□ -0.86
UPF3B-201ENST00000276201 ETHE1O95571 254 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 SOD1P00441 154 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 PSKH1P11801 424 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 ATP1B2P14415 290 aaPredicted RBP9.69□□□□□ -0.86
UPF3B-201ENST00000276201 POU2F1P14859 743 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 GNSP15586 552 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 APEX1P27695 318 aaKnown RBP9.69□□□□□ -0.86
UPF3B-201ENST00000276201 SERPINA4P29622 427 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 MAT2AP31153 395 aaKnown RBP9.69□□□□□ -0.86
UPF3B-201ENST00000276201 ETV5P41161 510 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 ETV1P50549 477 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 ATP12AP54707 1039 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 PLA1AQ53H76 456 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 LRRC73Q5JTD7 316 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 ENTPD8Q5MY95 495 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 ZNF648Q5T619 568 aaPredicted RBP9.69□□□□□ -0.86
UPF3B-201ENST00000276201 PDZD3Q86UT5 571 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 VRK3Q8IV63 474 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 RNF175Q8N4F7 328 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 ARIH2OSQ8N7S6 290 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 TM9SF4Q92544 642 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 HGDQ93099 445 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 UCN3Q969E3 161 aa9.69□□□□□ -0.86
UPF3B-201ENST00000276201 PPCDCQ96CD2 204 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms