RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 UBE2Q1Q7Z7E8 422 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 CDH24Q86UP0 819 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 ZNF300Q96RE9 604 aaPredicted RBP12.92□□□□□ -0.34
NPC1-201ENST00000269228 LYSMD1Q96S90 227 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 C1GALT1Q9NS00 363 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 ADAM29Q9UKF5 820 aa12.92□□□□□ -0.34
NPC1-201ENST00000269228 BCAP31P51572 246 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 CASP6P55212 293 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 ZP2Q05996 745 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 MAP4K2Q12851 820 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 SYPL1Q16563 259 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 PYCR3Q53H96 274 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 LIPKQ5VXJ0 399 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 GPR137CQ8N3F9 429 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 METTL25Q8N6Q8 603 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 SLC22A31A6NKX4 558 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 STSP08842 583 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 GSTT2BP0CG30 244 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 UBL4AP11441 157 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 OR1D5P58170 312 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 PFN3P60673 137 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 PPP2CBP62714 309 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 PPP2CAP67775 309 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 REEP5Q00765 189 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 ASTLQ6HA08 431 aaPredicted RBP12.91□□□□□ -0.34
NPC1-201ENST00000269228 LEG1Q6P5S2 330 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 SAMD8Q96LT4 415 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 CLCC1Q96S66 551 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 DCAF13Q9NV06 445 aaKnown RBP12.91□□□□□ -0.34
NPC1-201ENST00000269228 WRBO00258 174 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 C7P10643 843 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 ITGB8P26012 769 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 CNR2P34972 360 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 DCTP40126 519 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 CDKN2CP42773 168 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 RAB38P57729 211 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 GMFBP60983 142 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 VBP1P61758 197 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 ARG2P78540 354 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 PLBD1Q6P4A8 553 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 Q6ZSR9 355 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 WDR20Q8TBZ3 569 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 FKBP10Q96AY3 582 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 GINS4Q9BRT9 223 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 MS4A8Q9BY19 250 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 CD93Q9NPY3 652 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 CBLCQ9ULV8 474 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 TMEM14AQ9Y6G1 99 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 SH3PXD2BA1X283 911 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 MT-ND2P03891 347 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 ZNF43P17038 809 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 GADD45AP24522 165 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 HOXC8P31273 242 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 ACTC1P68032 377 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 ACTA1P68133 377 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 DCAF12Q5T6F0 453 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 TMEM236Q5W0B7 351 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 IL17RCQ8NAC3 791 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 HPS1Q92902 700 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 LIN28AQ9H9Z2 209 aaKnown RBP12.91□□□□□ -0.34
NPC1-201ENST00000269228 RXFP3Q9NSD7 469 aa12.91□□□□□ -0.34
NPC1-201ENST00000269228 ACSS1Q9NUB1 689 aaPredicted RBP12.91□□□□□ -0.34
NPC1-201ENST00000269228 USP36Q9P275 1121 aaKnown RBP12.91□□□□□ -0.34
NPC1-201ENST00000269228 TAF1LQ8IZX4 1826 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 SLC5A10A0PJK1 596 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 METTL21EPA6NDL7 271 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 UBFD1O14562 309 aaKnown RBP12.9□□□□□ -0.34
NPC1-201ENST00000269228 AP1G1O43747 822 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 ITIH1P19827 911 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 CSNK1G2P78368 415 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 TNFRSF17Q02223 184 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 TLE3Q04726 772 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 DPTQ07507 201 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 EFR3AQ14156 821 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 C18orf63Q68DL7 685 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 OR5M10Q6IEU7 315 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 ZNF595Q8IYB9 648 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 PATE1Q8WXA2 126 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 SEMA6CQ9H3T2 930 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 CCRL2O00421 344 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 SIGLEC6O43699 453 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 DCKP27707 260 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 MICAQ29983 383 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 ZNF227Q86WZ6 799 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 MEX3DQ86XN8 651 aaKnown RBP12.9□□□□□ -0.34
NPC1-201ENST00000269228 SNX29P2Q8IUI4 249 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 OR51L1Q8NGJ5 315 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 SFXN5Q8TD22 340 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 DNAJA4Q8WW22 397 aaPredicted RBP12.9□□□□□ -0.34
NPC1-201ENST00000269228 OR5B2Q96R09 309 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 KIR3DX1Q9H7L2 352 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 TTC3P53804 2025 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 A0A1W2PPK0 400 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 TLCD2A6NGC4 264 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 I6L893 689 aaPredicted RBP12.9□□□□□ -0.34
NPC1-201ENST00000269228 CASC3O15234 703 aaKnown RBP12.9□□□□□ -0.34
NPC1-201ENST00000269228 JRKO75564 520 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 GATBO75879 557 aaKnown RBP12.9□□□□□ -0.34
NPC1-201ENST00000269228 ZFAND5O76080 213 aa12.9□□□□□ -0.34
NPC1-201ENST00000269228 PPP1R3DO95685 299 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms