RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 OR7D2Q96RA2 312 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 ADOQ96SZ5 270 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 PAIP1Q9H074 479 aaKnown RBP16.87■□□□□ 0.29
SDF4-201ENST00000263741 TRIM45Q9H8W5 580 aaPredicted RBP16.87■□□□□ 0.29
SDF4-201ENST00000263741 Q9N2J8 555 aa16.87■□□□□ 0.29
SDF4-201ENST00000263741 FAF1Q9UNN5 650 aaPredicted RBP16.87■□□□□ 0.29
SDF4-201ENST00000263741 A0A1W2PP18 115 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 TO15178 435 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 REM1O75628 298 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 PPM1BO75688 479 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 IGKV1D-16P01601 117 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 RFC3P40938 356 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 NTRK2Q16620 822 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 EXOSC6Q5RKV6 272 aaKnown RBP16.86■□□□□ 0.29
SDF4-201ENST00000263741 CDC73Q6P1J9 531 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 FIGNL1Q6PIW4 674 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 RTL4Q6ZR62 310 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 OLIG3Q7RTU3 272 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 SNX32Q86XE0 403 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 SLC15A4Q8N697 577 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 COX18Q8N8Q8 333 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 LSM14AQ8ND56 463 aaKnown RBP16.86■□□□□ 0.29
SDF4-201ENST00000263741 HOXB13Q92826 284 aaPredicted RBP16.86■□□□□ 0.29
SDF4-201ENST00000263741 ACTRT3Q9BYD9 372 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 TRIM8Q9BZR9 551 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 VCXQ9H320 206 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 IL1RL2Q9HB29 575 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 DEPPQ9NTK1 212 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 FBXO34Q9NWN3 711 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 FLRT3Q9NZU0 649 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 CBLCQ9ULV8 474 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 PCNX3Q9H6A9 2034 aa16.86■□□□□ 0.29
SDF4-201ENST00000263741 NKX2-2O95096 273 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 SP1P08047 785 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 SNRPB2P08579 225 aaKnown RBP16.85■□□□□ 0.29
SDF4-201ENST00000263741 ALOX5P09917 674 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 CD46P15529 392 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 MAN2A2P49641 1150 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 COX20Q5RI15 118 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 ZAR1Q86SH2 424 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 TREML1Q86YW5 311 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 MSRB3Q8IXL7 192 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 BCORP1Q8N888 145 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 RAB8BQ92930 207 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 TMEM125Q96AQ2 219 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 NEURL3Q96EH8 262 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 SLC35A4Q96G79 324 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 SCMH1Q96GD3 660 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 C1orf21Q9H246 121 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 OR51I1Q9H343 314 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 SLC25A37Q9NYZ2 338 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 PCDHB14Q9Y5E9 798 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 PCDHGA10Q9Y5H3 936 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 CHCHD2Q9Y6H1 151 aaPredicted RBP16.85■□□□□ 0.29
SDF4-201ENST00000263741 LOC100653049A0A140TA62 436 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 PINLYPA6NC86 204 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 FBP2O00757 339 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 ANGPT2O15123 496 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 NME2P1O60361 137 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 KRT34O76011 436 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 SORBS2O94875 1100 aaKnown RBP16.85■□□□□ 0.29
SDF4-201ENST00000263741 HOXB9P17482 250 aaPredicted RBP16.85■□□□□ 0.29
SDF4-201ENST00000263741 MATN1P21941 496 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 NME2P22392 152 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 IL12BP29460 328 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 PIGAP37287 484 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 MRPS22P82650 360 aaKnown RBP16.85■□□□□ 0.29
SDF4-201ENST00000263741 SLC25A25Q6KCM7 469 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 ZNF843Q8N446 348 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 HORMAD2Q8N7B1 307 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 TRIML2Q8N7C3 387 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 NODALQ96S42 347 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 NTNG1Q9Y2I2 539 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 NDUFAF1Q9Y375 327 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 ZNF462Q96JM2 2506 aa16.85■□□□□ 0.29
SDF4-201ENST00000263741 TSPAN2O60636 221 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 PAX7P23759 505 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 DNASE1L1P49184 302 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 TMED10P49755 219 aaKnown RBP16.84■□□□□ 0.29
SDF4-201ENST00000263741 MLLT10P55197 1068 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 LRRC74AQ0VAA2 488 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 BHLHB9Q6PI77 547 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 GPALPP1Q8IXQ4 340 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 RBM15BQ8NDT2 890 aaKnown RBP16.84■□□□□ 0.29
SDF4-201ENST00000263741 ADAMTS15Q8TE58 950 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 ZFP90Q8TF47 636 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 TIMMDC1Q9NPL8 285 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 TMEM45AQ9NWC5 275 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 VAPAQ9P0L0 249 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 A0A096LPI6 279 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 CPA2P48052 419 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.84■□□□□ 0.29
SDF4-201ENST00000263741 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.84■□□□□ 0.29
SDF4-201ENST00000263741 CISD2Q8N5K1 135 aaKnown RBP16.84■□□□□ 0.29
SDF4-201ENST00000263741 DIO2Q92813 273 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 HGDQ93099 445 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 COL21A1Q96P44 957 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 TAAR6Q96RI8 345 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 CCDC106Q9BWC9 280 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 PIGUQ9H490 435 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms