RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 UBXN2BQ14CS0 331 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 GPR68Q15743 365 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 DECR1Q16698 335 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 C11orf91Q3C1V1 193 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 DCST2Q5T1A1 773 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 CCNJQ5T5M9 372 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 MFSD4BQ5TF39 518 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 C16orf87Q6PH81 154 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 SLC46A3Q7Z3Q1 461 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 ZNF619Q8N2I2 560 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 FAM26EQ8N5C1 309 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 DEFB119Q8N690 84 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 SLC15A4Q8N697 577 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 TOR1AIP2Q8NFQ8 470 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 WDR36Q8NI36 951 aaKnown RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 TEX47Q8TBZ9 253 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 DOK4Q8TEW6 326 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 ZDHHC16Q969W1 377 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 ANKRD9Q96BM1 317 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 VMP1Q96GC9 406 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 GPA33Q99795 319 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 ZNF350Q9GZX5 532 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 MAT2BQ9NZL9 334 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 METTL12A8MUP2 240 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 HCRTR1O43613 425 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 TLX2O43763 284 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 SRPX2O60687 465 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 WNT1P04628 370 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 DBIP07108 87 aaKnown RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 HSMCR30P0CW71 290 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 NME1P15531 152 aaKnown RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 GADD45AP24522 165 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 FASLGP48023 281 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 TUBA1BP68363 451 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 LSM11P83369 360 aaKnown RBP eCLIP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 HOXC5Q00444 222 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 NCF4Q15080 339 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 MED22Q15528 200 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 CCDC85BQ15834 202 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 EXOSC6Q5RKV6 272 aaKnown RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 SLC25A30Q5SVS4 291 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 TUBA1AQ71U36 451 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 PRICKLE2Q7Z3G6 844 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 RANBP3LQ86VV4 465 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 ARL14Q8N4G2 192 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 OR9A4Q8NGU2 314 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 GPR151Q8TDV0 419 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 LMX1AQ8TE12 382 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 S100ZQ8WXG8 99 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 ACOT11Q8WXI4 607 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 TCTN2Q96GX1 697 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 SLC41A3Q96GZ6 507 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 TMEM80Q96HE8 168 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 SH3YL1Q96HL8 342 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 PLEKHA8Q96JA3 519 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 UCK1Q9HA47 277 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 HMG20AQ9NP66 347 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 CHST10O43529 356 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 PRKYO43930 277 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 OR10H2O60403 315 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 PROS1P07225 676 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 SLC35E2P0CK97 266 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 DBTP11182 482 aaKnown RBP12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 RPS4Y1P22090 263 aaKnown RBP12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 CSTF2P33240 577 aaKnown RBP eCLIP12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 UGT2B10P36537 528 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 OPRL1P41146 370 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 CAPZBP47756 277 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 RGS6P49758 472 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 EEF1A1P68104 462 aaKnown RBP12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 MGAT2Q10469 447 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 ZNF846Q147U1 533 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 EXOSC7Q15024 291 aaKnown RBP12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 SMAD2Q15796 467 aaKnown RBP12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 NIPAL1Q6NVV3 410 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 SLC27A4Q6P1M0 643 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 RASSF6Q6ZTQ3 369 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 GDF7Q7Z4P5 450 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 KIF18BQ86Y91 864 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 SHISA5Q8N114 240 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 ARHGEF39Q8N4T4 335 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 FNDC8Q8TC99 324 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 PMM1Q92871 262 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 CTHRC1Q96CG8 243 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 HSPBAP1Q96EW2 488 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 TSSK6Q9BXA6 273 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 PRRG3Q9BZD7 231 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 WDR12Q9GZL7 423 aaKnown RBP12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 SAP130Q9H0E3 1048 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 PCED1AQ9H1Q7 454 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 DCSTAMPQ9H295 470 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 KRCC1Q9NPI7 259 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 TAS2R16Q9NYV7 291 aa12.05□□□□□ -0.48
SPTLC1-201ENST00000262554 A0A1W2PR77 199 aa12.04□□□□□ -0.48
SPTLC1-201ENST00000262554 CLDN25C9JDP6 229 aa12.04□□□□□ -0.48
SPTLC1-201ENST00000262554 COQ9O75208 318 aa12.04□□□□□ -0.48
SPTLC1-201ENST00000262554 SOX30O94993 753 aa12.04□□□□□ -0.48
SPTLC1-201ENST00000262554 CT62P0C5K7 136 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms